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scnpilot_solids1_trim150_scaffold_1829_curated_10

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(7707..8561)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Ruania albidiflava RepID=UPI0003B468BE similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 267.0
  • Bit_score: 357
  • Evalue 1.50e-95
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAK73355.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 281.0
  • Bit_score: 257
  • Evalue 1.80e-65
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 281.0
  • Bit_score: 255
  • Evalue 1.50e-65

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAATCGGACTGACAGCGCCCCGCGCCACGCGGTCAAGACGAGCGCCCGTTACCTCGTCCTGATCGTGGTGTCGCTGCTGCTCATCGGCCCGGTGCTGTGGATGGTGAGTGCATCCGTCAAATCTTTCAACGAGGTCCGTGTTTTCCCGCCCTCGATCCTGCCCATTCACTTCCGCTGGGACAACTACGCGCAGATATTCCAAATGCAGCCCTTTGCGCGACAGTTCGGCAACTCGATCCTGGTGATGGTGGCGGTCTGCGTCCTGACGGTGGCGCTTTCGCTGCCCGCCGGCTACGCGCTGGCGCGGGTGCGCCCGGTCGCCTCGTCGATCATCTTCGTCATCCTGCTGTCCGGCATCTTCCTGCCGCCCGAGGCGACGATTATTCCGTTGTTCCTGCTCGCCTCCAAGCTCGGCTGGGTCAACACGCTGTGGCCGCTGATCATCTTTACGGCGGTGCTCACCACCACGCCCATCGCCACCTTCATCATGCGACAGGCGTTCCTGACCCTTCCGATCGAGTTCGACGAGGCGGCGACCCTCGACGGCGCCGGCCGCATGCGGACCATGTTGCAGATCTCGACGCCGCTGGTCCGGCCGTCGCTGGCGTCCGTCGTCGTCATCTCCTGCTGGTACAGCTGGAATCAGTTCCTGGAGCCGCTGGTCTATATCCGGGACGTGAAACTGTTGACGGTGCCGGTGGCGTTGACGCGGTTTACGGATACGACGGGGCAGTCGTTGTGGAACGTGCAGATGGCCGCCACCACGATCTCGATCCTGCCGGTGCTCGTGGTGTTCTTCCTCGCGCAGCGTCACGTTGTCGCTGGGCTCGCCGCGGGTGGGCTCAAGACATAG
PROTEIN sequence
Length: 285
MNRTDSAPRHAVKTSARYLVLIVVSLLLIGPVLWMVSASVKSFNEVRVFPPSILPIHFRWDNYAQIFQMQPFARQFGNSILVMVAVCVLTVALSLPAGYALARVRPVASSIIFVILLSGIFLPPEATIIPLFLLASKLGWVNTLWPLIIFTAVLTTTPIATFIMRQAFLTLPIEFDEAATLDGAGRMRTMLQISTPLVRPSLASVVVISCWYSWNQFLEPLVYIRDVKLLTVPVALTRFTDTTGQSLWNVQMAATTISILPVLVVFFLAQRHVVAGLAAGGLKT*