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scnpilot_solids1_trim150_scaffold_1698_curated_34

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(32202..32546)

Top 3 Functional Annotations

Value Algorithm Source
Cro/Cl family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI0003705C67 similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 108.0
  • Bit_score: 135
  • Evalue 3.80e-29
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 110.0
  • Bit_score: 130
  • Evalue 3.80e-28
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW09507.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 110.0
  • Bit_score: 130
  • Evalue 1.70e-27

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGACAACACCCAGGCGCAAGGTGTCCTACCGGTGGCTGCTACGCGAGGTGATGGCCAGCCACAAGCTTTACGCCACAACCGAACTGGTGCCGCTTTTGGCCGAGCGCGGCATCATACTGTCCGCCTCGCAAGTGCACCGGCTGGTCACCAGCCCGCCGGAGCGGCTGTCCATGCCGGTCCTGGCCGCCCTGTGTGACATCTTCGGCGTCGGCCCCGGCGATCTGATCGAAACCGACGCCGTCGATGTCGGGGTGCGCAAGGTTGCCGCCTCCGACCGGCCCGCCCGCCCGTCGACGGGCGACATGACGCGGCCGCGCCGCGCCCGCATCCTGCCCGGCCCGTGA
PROTEIN sequence
Length: 115
MTTPRRKVSYRWLLREVMASHKLYATTELVPLLAERGIILSASQVHRLVTSPPERLSMPVLAALCDIFGVGPGDLIETDAVDVGVRKVAASDRPARPSTGDMTRPRRARILPGP*