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scnpilot_solids1_trim150_scaffold_1001_curated_24

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 25065..25754

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Rhodococcus sp. R1101 RepID=UPI000319271B similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 228.0
  • Bit_score: 364
  • Evalue 5.90e-98
XRE family transcriptional regulator {ECO:0000313|EMBL:KHJ72259.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 2.40e-97
two-component system response regulator; K07776 two-component system, OmpR family, response regulator RegX3 similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 228.0
  • Bit_score: 359
  • Evalue 1.00e-96

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Taxonomy

Rhodococcus sp. Chr-9 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACGCGGGTACTGATCGTCGAAGACGAAGAAGCCATGGCGACACCGCTGGCGTTCCTGCTGGAGCGCGAGGGTTTCGAGGCCGTGGTCGCCGGCACCGGCCCGGACGGACTCGCCGAGTTCGACCGCGGCGGTGCCGACATCGTGCTGCTCGACCTGATGCTGCCCGGCATGAACGGCATCGAGGTCTTCAAGGAGTTGCGCACCCGTTCCGGCGTGCCCGTCATCATGGTCACGGCCCGCGACACCGAGGTCGACCGGGTGGTCGGCCTGGAGCTCGGCGCGGACGACTACGTCACCAAGCCGTACTCCGCCCGGGAGCTGATCGCCCGCATCCGGGCCGTGCTGCGCAGGACAGAGGCCGACAACGGTGAGGTCGGCGAGTATGACGCCGTCCTCGAGGCGGGCCCGGTGCGTATGGATGTGGACCGCCATCAGGTGACCGTGGACGGCGCCGGGATCGCGTTGCCGCTCAAGGAGTTCGATCTGCTCGAGTACCTGCTGCGGCACGTCGGCCGGGTGCTGACCCGCGGCCAACTGATCGAGCGGGTCTGGGGCGCCGACTACGTCGGGGACACCAAGACGCTGGATGTGCACGTGAAGCGACTGCGGTCGAAGATCGAACCCGACCCGGCCGAACCCCGGCACCTCGTCACGGTGCGCGGACTGGGCTACAAATTCGAACCCTGA
PROTEIN sequence
Length: 230
MTRVLIVEDEEAMATPLAFLLEREGFEAVVAGTGPDGLAEFDRGGADIVLLDLMLPGMNGIEVFKELRTRSGVPVIMVTARDTEVDRVVGLELGADDYVTKPYSARELIARIRAVLRRTEADNGEVGEYDAVLEAGPVRMDVDRHQVTVDGAGIALPLKEFDLLEYLLRHVGRVLTRGQLIERVWGADYVGDTKTLDVHVKRLRSKIEPDPAEPRHLVTVRGLGYKFEP*