ggKbase home page

scnpilot_solids1_trim150_scaffold_1001_curated_26

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28370..29167)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000369BA8A similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 258.0
  • Bit_score: 269
  • Evalue 5.10e-69
Glucitol operon repressor {ECO:0000313|EMBL:KJF18751.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 257.0
  • Bit_score: 268
  • Evalue 9.30e-69
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 267.0
  • Bit_score: 267
  • Evalue 6.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGCTGGCCAGTCAGCGCAGGACGTTGATCGCCGCCGAGGTGCAGCGGCGCGGCGCGGCGCGCGTCATCGACCTCACCGCCCGTTTCGACGTGTCCGATATGACGATCCGCCGGGACCTGGAAATGCTGGAATCGGAAGGACGCGTCCGCAAGGTGCACGGTGGTGCCGTCGCCGTCGGCAGCAGCATCGACGAGCCGGGCTTCGAGGCGAAACGAGGCATCAACACTCCCGCCAAACGTGCCATTGCCGCGAGAGCTGCGGAGCTGATCGCGCCGCGATCGGCCATCGGCATCTCTGCGGGCACCACGACCTGGATGCTGGCCGAAACCGTCGCGGCCATGGCCGAGCCGCTGTCGATCGTCACCAACTCGACCACCGTCGCCGATGCGCTGGCCGCTCCCGGGGCCGTCGGGAAGAGCGTCATCCTCACTGGTGGCCTGCGCACTCCCAGCGCCGCGCTGGTCGGCGCGGTGGCCGACCGCGCCATCGAGTCGCTGCACGTCGACCGGCTCTTCCTCGGCGTGCACGGCATGGATGCCGCCGCGGGGCTGACCACCCCGAACCTGGCCGAGGCGCATACCGATGCCGCCTTCATCAGCCGCGCCAGGCACGTCGTGGTGCTCGCCGACTCGTCCAAGTGGTCCACGATCGGCTTGGCGACCATCGCGCCGCTGACGGCCGTCGATATCCTGATCACCGACGACGGTCTGCCCGCCGAAGCGCGCCAGGTGTTGCGGGATTGCGTCGGCGAGCTCGTCGTCGTGCCGGTCGGATCCGAGGCGACGCTCGCCGGGTAG
PROTEIN sequence
Length: 266
MLASQRRTLIAAEVQRRGAARVIDLTARFDVSDMTIRRDLEMLESEGRVRKVHGGAVAVGSSIDEPGFEAKRGINTPAKRAIAARAAELIAPRSAIGISAGTTTWMLAETVAAMAEPLSIVTNSTTVADALAAPGAVGKSVILTGGLRTPSAALVGAVADRAIESLHVDRLFLGVHGMDAAAGLTTPNLAEAHTDAAFISRARHVVVLADSSKWSTIGLATIAPLTAVDILITDDGLPAEARQVLRDCVGELVVVPVGSEATLAG*