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scnpilot_solids1_trim150_scaffold_1001_curated_31

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(33610..34584)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SEN6_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 308.0
  • Bit_score: 415
  • Evalue 4.10e-113
Binding-protein-dependent transport permease {ECO:0000313|EMBL:CCH76425.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 296.0
  • Bit_score: 417
  • Evalue 2.00e-113
carbohydrate ABC transporter permease; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 308.0
  • Bit_score: 415
  • Evalue 1.30e-113

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGACGGCGGTAGCGGATGCCTCCGCGCGCGCGGGTTCGCACCGCGGGCCGGGTGGAGGGGTGAAGCGCTCGGGTCGCTGGCGATCGTGGCTGCCCGGCCTGGCCATGGTGGCGCCCTCGATGGTCCTGATCGGGGTCTTCGTCTACTACCTGCTGTTCAAGAACGCGGCGACGTCCATGACGGACAAGCACTCGTTCAACCCGAACGCCGACGTGCACTTCGTGGGCGTCGACAACTACATTTCGCTGTTCGGCGAGCCGTACTACCAGCACACGCTGTGGAACCTGCTCGTGCTCACCGTCGTGTTCCTGGCCGGCACCATGTTCTTCGGCCTGCTATGGGCGCTGCTGCTGGAGAAGGGCGTCACCGGCGAGGGTATCTTCCGCTCGGTCTACCTCTTCCCGATGGCGGTCTCGTTCGTCGCGGCCGGCGTCGTCTGGAAGTGGCTGTTGTCCAACCGCACCGGCGATCAGGCGATCGGGCTCAATCAGCTGTTCCAGCATCTCGGCTTGGACTTCCTGCAGAACTCCTGGTGGTCATCGACCGCGGCCTTCAACATGGCGGCCATGGCGATCCCGGCGATCTGGCAGCTGTCCGGCTACGTGATGGCGCTGTTCCTGGCCGGATTCCGCGGAATCCCGGACGACCAGCGTGAGGCTGCCCGCATGGACGGCGCCTCCGAATACCAGATCTACCGGCATGTGCTGTTCCCGCAGCTGTCCCCGATCGCGCTGTCCGCGCTGATCATCATCGGGCACATGTCGATGAAGATGTTCGACCTGATCTACTCGATCGCCGGCGCGAACAGCTACCCGGCCGCCGTGCCCGCCACGTACATGTGGACGCAGCTGTTCTCCAAGTCCGATCCGGCGAACGCCTCGGCGAACGCGACCATCCTGCTGATCATCGTGGCGGTGGTCGTGGTGCCCTACCTGATCTACACGAACCGCGTCGAGAAGAGGTCCGGATCGTGA
PROTEIN sequence
Length: 325
MTAVADASARAGSHRGPGGGVKRSGRWRSWLPGLAMVAPSMVLIGVFVYYLLFKNAATSMTDKHSFNPNADVHFVGVDNYISLFGEPYYQHTLWNLLVLTVVFLAGTMFFGLLWALLLEKGVTGEGIFRSVYLFPMAVSFVAAGVVWKWLLSNRTGDQAIGLNQLFQHLGLDFLQNSWWSSTAAFNMAAMAIPAIWQLSGYVMALFLAGFRGIPDDQREAARMDGASEYQIYRHVLFPQLSPIALSALIIIGHMSMKMFDLIYSIAGANSYPAAVPATYMWTQLFSKSDPANASANATILLIIVAVVVVPYLIYTNRVEKRSGS*