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scnpilot_solids1_trim150_scaffold_1150_curated_8

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(7142..7972)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA02_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 262.0
  • Bit_score: 287
  • Evalue 1.40e-74
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 262.0
  • Bit_score: 287
  • Evalue 4.50e-75
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACV81202.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 262.0
  • Bit_score: 287
  • Evalue 2.00e-74

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGAGCGGCAAGCGGCGGTCGAGATCCGTTTCGCTGGTGGGTCTGTCGACGTCCTCCGTGTTCCCGGAAGGCACCGAGCGGGCATTCGTGCTGGCGGCCGAGCTCGGTTACGACGGAGTCGAGCTGATGGTGACCGCGGATCGACTCACTCAGGACGCCGGCCGGCTGGCGGCGCTCGTCGAGCGGTATGACGTGCCGGTGCTGTCGGTGCACTCGCCGTGCCTGGCGATCTCCGCGCGGGTGTGGGGTACGGACCCGGTGGGCAAGATCGCCCGCAGCCTGGAGCTCGCCGTGGATCTGGGCGCACGAACCGTCGTCGCCCACCCCCCGTTCCTGTGGCAGCCGGGCGTGGCGAAGGCCTTCCCCGCGGCCGTGGAGGAGTTCGCGGCGTCCACCGATGTGGTCGTGGCGATCGAGAACATGTACCCCGTTCCGGTTCTCGGTGTGCCGGTCAGCACCTACCGGCCGCATTGGGACGTGGCCGAGACGGGCTATCCCGCGTACACGCTGGATCTGTCGCACACGTCGGTTGCCGGTGTGGACGCCGTCGATGCGGCGGCGGCGATGGGCCGCCGGCTTGCGCACCTGCACCTGGGCGACGGCTCCGGACAGACCCGCGACGAGCATCTGGTGCCGGGCCGCGGCCGGGTGCGCTGCGCGGAGGTGCTCGCCGGGATCGCTCAAGGCGCGTTCGGGGCGCGCGACGAGACCGGCGGCTTCGCGGGCGCCGTGATCCTGGAGGTCTCCACCCGGACTCGGGACAATGCCCAGCGCGCCACGGATCTCGCCGAGGCGCTGGCGTTCGCCCGGGAGCACCTGGGCCGGACGTAG
PROTEIN sequence
Length: 277
MSGKRRSRSVSLVGLSTSSVFPEGTERAFVLAAELGYDGVELMVTADRLTQDAGRLAALVERYDVPVLSVHSPCLAISARVWGTDPVGKIARSLELAVDLGARTVVAHPPFLWQPGVAKAFPAAVEEFAASTDVVVAIENMYPVPVLGVPVSTYRPHWDVAETGYPAYTLDLSHTSVAGVDAVDAAAAMGRRLAHLHLGDGSGQTRDEHLVPGRGRVRCAEVLAGIAQGAFGARDETGGFAGAVILEVSTRTRDNAQRATDLAEALAFAREHLGRT*