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scnpilot_solids1_trim150_scaffold_629_curated_20

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(20945..21886)

Top 3 Functional Annotations

Value Algorithm Source
Permease component of ABC-type dipeptide/oligopeptide/nickel transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8HT16_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 308.0
  • Bit_score: 386
  • Evalue 2.60e-104
ABC dipeptide/oligopeptide transporter permease; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 308.0
  • Bit_score: 386
  • Evalue 8.10e-105
ABC dipeptide/oligopeptide transporter permease {ECO:0000313|EMBL:AEK38563.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 308.0
  • Bit_score: 386
  • Evalue 3.60e-104

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GTGTGGTGGGGGCTGGTCCGCCGGTTGCTGATCTTCCTGGTCAGTACCGCGGTCGCGTCCGTTGTGGTCTTCGTGCTGCTGACCTTAGTCGGAGACCCGGCACGGACTGCTCTGGGTACGAACGCCACTCCCGAAGCGCTCGCCGAGATGCGGCACCGGATGGGTCTGGATCGTCCGGTCACCACACAGTTCGCGTCGTGGATCGGCGGGATGGTGCACGGCGATTTCGGCACGTCCTATGTGACGCACCTGCCCATCGGCCCGCAGATCGGTGCCCGGTTGGCGGTGACGATGTGGCTGGTCGCCGGCGGCATGGCAGTGGCACTGGTGGTCGCGATCCCGATGGGAACGATCGCGGCCCTCAAACACCGCACCTGGGCCGGGTGGCTGTTGTCCTCACTGTCCCAGGTGGGCATCGCCGTCCCCGCCTTCCTGGCCGGCATCCTGATGGTCGCGCTGGTCTCGGTGGAACTCGGCTGGCTGCCCTCCGGTGGCTTCGTCGTCCCCGCGGAGGACCCCGGCGGATTCCTGGCCCGGATGATCCTGCCGTGGCTGTCGCTGGGGCTGGTGCAGGGAGCGGTGCTGGCCCGGTATGTGCGCTCGGCCGTGCTGGACGAGGTGGGGCAGGACTATCTGCGCACCGCACGGGCCAAGGGGCTCACCCGATGGCGTGCGACATGGCGGCACGGACTGCGCAATGCAGCGATTCCGGTGCTCACCGTGATCGGCGTGCAGCTGGTGACGATCCTGATCGGCGCCGTGGTCGTCGAGCGGGTGTTCGTGATCCCCGGCATCGGCTCCTACCTGGTGGATTCCGTCGCGCGGCAGGACCGGCTTGCCGTGCAGGGCATCGTCGTCACCATCGTGGCGATCTCGCTGGCGGTGAGCTTCGTCGTCGACGTCGCCTACACCGTGATCGATCCCCGGCTGCGGAGGAGGTGA
PROTEIN sequence
Length: 314
VWWGLVRRLLIFLVSTAVASVVVFVLLTLVGDPARTALGTNATPEALAEMRHRMGLDRPVTTQFASWIGGMVHGDFGTSYVTHLPIGPQIGARLAVTMWLVAGGMAVALVVAIPMGTIAALKHRTWAGWLLSSLSQVGIAVPAFLAGILMVALVSVELGWLPSGGFVVPAEDPGGFLARMILPWLSLGLVQGAVLARYVRSAVLDEVGQDYLRTARAKGLTRWRATWRHGLRNAAIPVLTVIGVQLVTILIGAVVVERVFVIPGIGSYLVDSVARQDRLAVQGIVVTIVAISLAVSFVVDVAYTVIDPRLRRR*