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scnpilot_solids1_trim150_scaffold_7789_curated_5

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(5290..6096)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WEL6_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 204.0
  • Bit_score: 104
  • Evalue 2.20e-19
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 204.0
  • Bit_score: 104
  • Evalue 6.90e-20
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACU37816.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 204.0
  • Bit_score: 104
  • Evalue 3.10e-19

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGACGCCGCCCGGGGCGATTGCCTATGTCTGGGCCGTGGCCCCGTGGCCCGATTCACATCAGGCAATTTTGCGCAATGCGCAAGGCACGGTTACCGTGGAGTTCATGAACACCGCAACGCACGGTCTCGGGGCGCCCTCCAAGGATCCGGTGGCCGGTCAGGCACTCGCCGGGCCGACGACGGACCCCATGGACACCGTGAGCCTGCGCGAGCGGAAGAAGGACGCCACCCGGAGGGCTCTGGCCGAACATTCGCTTCTGCTCGCGCAGAGCCGCGGCTACGCCGGGTTCACGATCGCGGATCTGGTGGCGGACGTGGGCGTCTCGCGACGTACGTTCTCCAACTACTTCGCGTCGAAAGCGGAGTGCGTCGCTGCCGTCACCGATGGTTGGCTGGACGATGTACTGGACGCAATCAGGAGTGCGCCGCCCGACGCGAGCCTGCTCGACGTGCTGCAGACCGGTCTGATCGCCGTCGCGCAGGATGGCGCCGAACGCTGGGGCGCGCTGCAAGAGGTTGCCGAGACCGCGCCGGAACTACAGGCGCAGATGCTTGCGGGCGACGAAATCGTCGCCGAACTGGTGACCGGCGAGGTGGCGCGCCGCACGACGCTGGGACCGGACGATATCCGCGTCAGGCTGCTGGCCGCTTTCGCAGTGACCGCGGGCCGCGAAGTGCTGACTCGCTGGGCCGCCACTCGGACGGCAACCGGTGGTGCCGTGGGCAATGCCGAGCTCGCGGATCTGCTCGGAACCGCATTCTCCATCATCGATCTCGGTGGGCTGCCTACTCCGCCGCGCACCTGA
PROTEIN sequence
Length: 269
MTPPGAIAYVWAVAPWPDSHQAILRNAQGTVTVEFMNTATHGLGAPSKDPVAGQALAGPTTDPMDTVSLRERKKDATRRALAEHSLLLAQSRGYAGFTIADLVADVGVSRRTFSNYFASKAECVAAVTDGWLDDVLDAIRSAPPDASLLDVLQTGLIAVAQDGAERWGALQEVAETAPELQAQMLAGDEIVAELVTGEVARRTTLGPDDIRVRLLAAFAVTAGREVLTRWAATRTATGGAVGNAELADLLGTAFSIIDLGGLPTPPRT*