ggKbase home page

scnpilot_solids1_trim150_scaffold_25989_curated_2

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 541..1173

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein, tetR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2H6_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 415
  • Evalue 4.60e-113
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF94421.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 415
  • Evalue 6.40e-113
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 204.0
  • Bit_score: 259
  • Evalue 1.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGTCGCTCGCATCTGCCGCATCGTCGCGTTCGACACGAAAACCCAAGGGTGAAGGGCACGAGCGCCGTGCAGAAATCCTGGCGGCGGCGGAAGGTATCTTCGTCGAGCGCGGCTATGAAGGCGCCACCATTCGCAAGATCGCGGATGAGGTGGGCCTGTCGTCGACCGCCCTCTATATGCACTTCGCGGACAAGGGCGAGATCCTCAACGAGATCTGTCGCAACGCCTTCGACACCCTGGCCGAGCAACACCGACGGACTTTGGCGGAGGATGCGCCTCCCTTGGCGCGGCTTCGGCGGATCGTCGAGAACTATATGGCGTTCGGATTCGCCAATCCCAACGCCTATCGCTTGGCTTATCTGACTCCGCAGGTCCATACGCGCCACGGCGCCGAGACCGTGGCGCAACAGAGCGGGGCCGACCTGTTCCGCGCCTTTGTCAGCGTGGTCGAGGAGGCTGTCGATCAAGGCGCGCTGCGAGGCGATCCGCGCACGCTGGCGCAAGTCATCTGGGCCAGCGCCCATGGGCTGGTCTCGATCATGACGACCAAGCCTTATTTCGATTGGGCGGATCGTGAGACCTTGGTCCGCACCCAGATGGACGCCTTGTTCGCGGGATTGACCGCCTCGTGA
PROTEIN sequence
Length: 211
VSLASAASSRSTRKPKGEGHERRAEILAAAEGIFVERGYEGATIRKIADEVGLSSTALYMHFADKGEILNEICRNAFDTLAEQHRRTLAEDAPPLARLRRIVENYMAFGFANPNAYRLAYLTPQVHTRHGAETVAQQSGADLFRAFVSVVEEAVDQGALRGDPRTLAQVIWASAHGLVSIMTTKPYFDWADRETLVRTQMDALFAGLTAS*