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scnpilot_solids1_trim150_scaffold_618_curated_12

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(10207..10608)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=2 Tax=Brevundimonas diminuta RepID=F4QYX5_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 133.0
  • Bit_score: 268
  • Evalue 3.30e-69
Helix-turn-helix family protein {ECO:0000313|EMBL:EGF94746.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 133.0
  • Bit_score: 268
  • Evalue 4.70e-69
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 127.0
  • Bit_score: 74
  • Evalue 3.80e-11

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GTGCCGGATTCGCAAAGCAAACAGGACTATAATCGCGCGATCGGCGAGCGCGTTCGGCGACGGCGAAAGGAACTCGGCCTGAGCCAGACGGCGCTCGGCGCGAAGATCGGCGTCTCGTGCCAGCAGATCCAGAAGTATGAAAACGGACGCAACAGCGTCGCGGCCTCACGGCTGCACCAGCTCTCGCTCGCGCTGGCGACCACGGCGCCGGCGCTTATCGGCCTCAAGTCCTGGGACGAGGGCGAAGACGGCGGCGAACGCGCGCGGTTGCTCCAGGCCTGGTCGGTCCTGCCGAACCATCAGCGCGAACCCCTGCTCCGCTACGTCGAGGCGCTCGCTCTGTCGGCGGACCCACATGTCACAGGCCGGGCGGATGACGACCCGGGCGGCGGCGATGGTTGA
PROTEIN sequence
Length: 134
VPDSQSKQDYNRAIGERVRRRRKELGLSQTALGAKIGVSCQQIQKYENGRNSVAASRLHQLSLALATTAPALIGLKSWDEGEDGGERARLLQAWSVLPNHQREPLLRYVEALALSADPHVTGRADDDPGGGDG*