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scnpilot_solids1_trim150_scaffold_22708_curated_1

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(3..353)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix protein, lysR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1N6_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 117.0
  • Bit_score: 230
  • Evalue 1.20e-57
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EGF94278.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 117.0
  • Bit_score: 230
  • Evalue 1.60e-57
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 116.0
  • Bit_score: 163
  • Evalue 3.20e-38

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAGAGACCTCAACGACCTCTATTATTTCGTGCAGGTGGTGGATCACCACGGCTTCGCCCCGGCGGCGCGGGCGCTGGGCATGCAGAAGTCCAAGCTCAGCCGCCGCATCGCCGCGCTGGAAGACCAGTTGGGCACGCGGCTGATCCAGCGCTCATCACGCAAATTCTCGGTCACAGAGATCGGGCTGGCCTATTATCAACACTGTCTCGCCATGCTGATCGAGGCCGAGGCGGCGCAGGCCTTGATCGACGGCGCCCGGTCCGAGCCGTGCGGCACGATCCGCGTCGCCTGCGCGCCGGGCCTGCTGACCTATCAGATGAGCAGTCTGATCGTCCGCTTCATGGCCCTG
PROTEIN sequence
Length: 117
MRDLNDLYYFVQVVDHHGFAPAARALGMQKSKLSRRIAALEDQLGTRLIQRSSRKFSVTEIGLAYYQHCLAMLIEAEAAQALIDGARSEPCGTIRVACAPGLLTYQMSSLIVRFMAL