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scnpilot_solids1_trim150_scaffold_36393_curated_1

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 130..741

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R075_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 198.0
  • Bit_score: 395
  • Evalue 3.60e-107
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 198.0
  • Bit_score: 395
  • Evalue 5.10e-107
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 166.0
  • Bit_score: 203
  • Evalue 8.30e-50

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCCCCAGCTCCGCATGCCCGAGGGGCCGAACGCCATCGAGCCCCCACCATCATCGCCCCCGATCGATCGGGCGCCGGACCTGGCCGATCCGGCCAATTGGCGCGCCATGCTGGCCTGCCAGATACCGGCGCTGCGGGCCTTCGGCTTTTCACTGGCGCGCAACCGCGCGGACGCCGACGACCTGGTTCAGGAGACCCTGGTCAAGGCCTGGGCCCACCGGGCGCGGTTCGAGACGGGGACCAATCTGCGGGCCTGGCTGTTCACCATTCTGAGGAACAGCTGGTACACCGGCGCCGCTCGCCGTCGACGCGAAGTGGCCGACGAGGAAGGCCGCCACGCCGCCAGCCTGACCTCAGAAGCCAACCAGGAATGGACCGCCGAGTTGACGGCGCTGCAACAGGCGCTGAACACCCTGCCGCCCGAACACCGCGAGGCCATCATCATGGTGGGCGCGGCGGGGCTCTCCTATCAGGAGGCGGCCGACATCGCCGGCTGCGCCGTGGGCACGGTCAAGAGCCGGGTCAACCGAGCCCGCCGCCGCCTGGCCCTGCTGCTGGCGCACGAACTCCCGCTCGACGGCGCCGAAAATAATGAGGGCGACGACAGCTAG
PROTEIN sequence
Length: 204
MPQLRMPEGPNAIEPPPSSPPIDRAPDLADPANWRAMLACQIPALRAFGFSLARNRADADDLVQETLVKAWAHRARFETGTNLRAWLFTILRNSWYTGAARRRREVADEEGRHAASLTSEANQEWTAELTALQQALNTLPPEHREAIIMVGAAGLSYQEAADIAGCAVGTVKSRVNRARRRLALLLAHELPLDGAENNEGDDS*