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scnpilot_solids1_trim150_scaffold_25941_curated_2

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 534..1445

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas dim similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 304.0
  • Bit_score: 592
  • Evalue 3.20e-166
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 304.0
  • Bit_score: 509
  • Evalue 6.20e-142
tRNA pseudouridine synthase B n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Z3_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 304.0
  • Bit_score: 592
  • Evalue 2.30e-166

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCACGACGCAAGAAGGGCGATCTCGTCAACGGCTGGGTGTGCCTGGACAAGCCCTATGAGATGGGTTCGACCGAGGCGGTGACGAAGATTCGTCGCCTGTTCAACGCCCAGAAGGCGGGCCATGCGGGCACGCTGGACCCGCTGGCCTCGGGCATACTGCCCATCGCGCTGGGCGAGGCGACCAAGACGGTGCCCTTCATGATGGAGGCGCAGAAGGTCTATCGCTTCACCATCCACTGGGGCATTTCGACCGACAGCATCGACCGCGAGGGCGAGATCATCGCTCGTTCCGACGTGCGCCCCTCGGTCGAGGCGGTGAAGGCCGCCCTGCCGTCCTTCGTCGGCGAGATCGATCAGACGCCGCCGGCCTTCTCGGCCGTACGGGTCAATGGCGAGCGCGCCTATGATCTGGCGCGGGCGGGGGTCGAGGTCGAGCTTCAGTCCCGCCGCGTGACCATTCATGAGGCCGCGGTGACGGCCGCGCCCGACGCCGATCACGTCGAGATCACGATGCGGACGGGCAAGGGCGTCTATGTCCGATCCCTGGCGCGCGACCTGGCGATCATGCTGGGCGCCGAGGGCCATGTCTCGGACCTGAGGCGCGAGCGGGTGGGACCGTTCTCGGTCGACAACGCCGTAACGCTGGATTTTCTGGAAGAGTTGGCGCATAAGGGCGCCGCCTTTGAGGGCTTGCTGCCCGTTTCGACCGCTCTGGACGACATCCCGGAGTTGGCCGTGACGGATCAGGACGCCCTCTCTCTGAGGCAGGGACGGCCGATCGTTCTGCTCCCCCGACAGATTGAAACCCTCAAGGACCGGCTGCCCGCCGGCTCGCGGCTGGTTTCGGTCTTCGAGGGCGGAACCCTGGTCGCGCTCGGCAATCTCAGGGCCGGTCGGCTTGAACCCGAT
PROTEIN sequence
Length: 304
MARRKKGDLVNGWVCLDKPYEMGSTEAVTKIRRLFNAQKAGHAGTLDPLASGILPIALGEATKTVPFMMEAQKVYRFTIHWGISTDSIDREGEIIARSDVRPSVEAVKAALPSFVGEIDQTPPAFSAVRVNGERAYDLARAGVEVELQSRRVTIHEAAVTAAPDADHVEITMRTGKGVYVRSLARDLAIMLGAEGHVSDLRRERVGPFSVDNAVTLDFLEELAHKGAAFEGLLPVSTALDDIPELAVTDQDALSLRQGRPIVLLPRQIETLKDRLPAGSRLVSVFEGGTLVALGNLRAGRLEPD