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scnpilot_solids1_trim150_scaffold_32410_curated_1

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: comp(3..1229)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 409.0
  • Bit_score: 722
  • Evalue 8.10e-206
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 409.0
  • Bit_score: 722
  • Evalue 3.60e-205
transcription-repair coupling factor n=1 Tax=Acidovorax radicis RepID=UPI00023777FA similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 409.0
  • Bit_score: 722
  • Evalue 2.60e-205

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
AGCCCGCGCCCCATGGATCGCCTCGTGTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCGCTGCGCGCGGCCTTCATCGCCGTCACCGGCGGCAAGCAGGTGGCACTGCTCGCGCCCACTACCTTGCTTGCCGAGCAGCACTACCAGACGCTGGTGGATCGCTTCGCGCGCTGGCCGGTGAAGGTGGCGCAGGTGAGCCGCTTTGCCTCGGGCAAGGAAAGCACGGCCGCGCTCAAGGGCCTGGCCGAGGGCAGCGTGGACATCGTCGTCGGCACGCACAAGCTGCTTTCCACCTCAACCAAGTTCAAGAACCTGGGCCTGCTCATCATCGACGAGGAGCACCGCTTCGGCGTGCGCCACAAGGAGGCGATGAAGGCCATGCGCGCCGAAGTCGATGTGCTCACGCTCACCGCCACGCCGATTCCGCGCACGATGGGGATGGCGCTGGAGGGGCTGCGCGATCTTTCCGTGATTGCCACCGCGCCGCAGCGGCGCCTGGCGATCAAGACCTTCTTGCGCGAAGAAAATCAAGGCGTGATCCGCGAGGCGGTGCTGCGCGAACTCAAGCGCGGCGGGCAGGTGTACTTCCTGCACAACGAGGTGGAGACGATAGAAAACCGCCGCGAGAAGCTGCAGGAAATCCTGCCCGAGGCGCGCATCGCCGTCGCCCACGGCCAGATGCCCGAGCGCCAGCTCGAACACGTGATGCGCGACTTCATCGCCCAGCGCACCAACGTGCTGCTGTGCTCGACCATCATCGAGACCGGCATCGACGTGCCCACGGCCAACACCATCCTGATCAGCCGCGCCGACAAGTTCGGCCTGGCGCAACTGCACCAGTTGCGCGGGCGCGTGGGGCGCAGCCACCACCAGGCCTACGCCTACCTCATGGTGCCCGACGTGCGCGGCCTCAAGGGGCACGCGGCGCAGCGCCTGGAAGCCATCCAGCAGATGGAGGAACTGGGCAGCGGCTTCTACCTGGCGATGCACGACCTGGAAATCCGCGGAGCGGGCGAAGTGCTGGGCGAGAACCAGTCGGGCAACATGATCGAGGTGGGCTTTCAGCTCTACAACGAGATGCTGGCCGAGGCCGTGCGCAGCCTGAAGGCCGGCAAGGAGCCCGACCTGCTGGCGCCGATGCAGGCCACGACCGACATCAACCTGCACGCCCCGGCGCTGCTGCCCAGCGACTACTGCGCCGACGTGCAGACGCGCCTGTCGCTC
PROTEIN sequence
Length: 409
SPRPMDRLVCGDVGFGKTEVALRAAFIAVTGGKQVALLAPTTLLAEQHYQTLVDRFARWPVKVAQVSRFASGKESTAALKGLAEGSVDIVVGTHKLLSTSTKFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFLREENQGVIREAVLRELKRGGQVYFLHNEVETIENRREKLQEILPEARIAVAHGQMPERQLEHVMRDFIAQRTNVLLCSTIIETGIDVPTANTILISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVRGLKGHAAQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMIEVGFQLYNEMLAEAVRSLKAGKEPDLLAPMQATTDINLHAPALLPSDYCADVQTRLSL