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scnpilot_solids1_trim150_scaffold_11849_curated_1

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: 3..698

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV63_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 6.40e-84
RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 2.00e-84
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV00595.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 184.0
  • Bit_score: 318
  • Evalue 8.90e-84

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
TCGATCCCGCTTACCTCCACCAATGCTAAAAAGGCCAACCGTTCGCGGTTGGCCTTTTTTTCATCCGCCTGTGCGCACCGTGGTCGTGTGCCTTCACGGCAGAGATGGAACTTTTGCGCGGCGTATGCGTTGATGGTGCCAATGCCTGCATCAAGTCCTCCTGATGAAACCGACTGCATTGCCCGAGCCCAGCGCGGTGAGGCTGCGGCGTTTTCCGAGCTGGTGACCCGTTACCAGGATCGCATCTACCGTTTCCTGGTGCGCATGACCCGCTCGCAGGAGGATGCGCGTGAGCTGACCCAGGAGACCTTTCTGAGCGCCTACCAGGCCATTGCGCGCTGGCGCCCGGAGGCGCGCCTGTCCACCTGGTTGTTTCGCATCGCGCGCAACCAGGCGCTGGATCGGCTGCGCCGTGCGCGGCACGTGGAGTTCGTGGCGCTGGACGAGGTGCTGCACGAGCAGCTGCCGGCGGACACGCCCACGCCCGAGGCCGTGCTGCAGGCACGCCAGCGCGTCGCGGCGCTGGAGGCCGCGCTGGCGCGGCTGTCGGTCGAGCACCGCGAGATCCTGCTGCTGCGCGACATCGAGGACATGCCCTACGAAGACATCGCGGAGGTGCTGGGCATCAGCCTGGGCACCGTCAAATCCCGCATCGCCCGTGCGCGCACCGGGCTGCTGCAACACATGCCACGCTGA
PROTEIN sequence
Length: 232
SIPLTSTNAKKANRSRLAFFSSACAHRGRVPSRQRWNFCAAYALMVPMPASSPPDETDCIARAQRGEAAAFSELVTRYQDRIYRFLVRMTRSQEDARELTQETFLSAYQAIARWRPEARLSTWLFRIARNQALDRLRRARHVEFVALDEVLHEQLPADTPTPEAVLQARQRVAALEAALARLSVEHREILLLRDIEDMPYEDIAEVLGISLGTVKSRIARARTGLLQHMPR*