ggKbase home page

scnpilot_solids1_trim150_scaffold_14298_curated_2

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: comp(891..1826)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline epimerase (EC:5.1.1.8) similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 309.0
  • Bit_score: 483
  • Evalue 3.70e-134
4-hydroxyproline epimerase {ECO:0000313|EMBL:AGU52481.1}; EC=5.1.1.8 {ECO:0000313|EMBL:AGU52481.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 309.0
  • Bit_score: 483
  • Evalue 1.70e-133
4-hydroxyproline epimerase n=1 Tax=Variovorax paradoxus B4 RepID=T1XIV6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 309.0
  • Bit_score: 483
  • Evalue 1.20e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCGCCAAGTCCACATCATCGACAGCCACACCGGCGGCGAGCCCACGCGCCTCGTCGTGGACGGCTTCCCTGACCTCGGCACGGGCAACATGGCCGAGCGCCGCGCGCTGCTGGCGAGCGAGCACGACGCCTGGCGCCGCGCCACGGTGCTGGAGCCGCGCGGCAACGACGTCATCGTCGGCGCCCTGCTGTGCCAGCCGGTGGACCCGCAGTGCGCGGCGGGCGTGATCTTCTTCAACAACGAGAGCTACCTGGGCATGTGCGGGCACGGCACCATCGGGCTCATCGCCTCGCTCGCGCACCTGGGGCGCATCGGCCCCGGCACGCACCGCATTGAAACCCCCGTGGGCGAGGTCACGACCACGCTGCACGAGGACGGTTCGGTGAGCGTGAGAAACGTCCCCGCCTACCGGCTGCTGGCCGATGTGCGCGTCAACCTGTCCGGCCACGGCACCGTGACGGGCGACGTCGCCTGGGGCGGCAACTGGTTCTACCTCGTGAGCGACCACGGCCTGCGCGTGGCGGTCGACAACCTGGCCGAGCTCACGCGCTTTGCCGCGCTGGCCCGCGATGCGCTCGAAGCGGCGGGAATCCGCGGCGCCGACGGCGCGAAGATCGACCACGTTGAGCTCTTTGCCGACGACCCCGGGGCCGACAGCCGCAGCTTCGTGCTCTGCCCCGGCGGCGCGTACGACCGCTCGCCCTGCGGCACCGGCACCAGCGCCAAGCTCGCGTGCCTGGTCGCGCGCGGCCGGCTCGCCCCCGGCCAGGTCTGGCGCCAGGCGAGCGTGATCGGCAGCCAGTTCCAGGCGCACTACGAGATGCAGGGCGAGCAGCTCATCCCGACGATCCGCGGACGCGCCTGGGTCTGCGCCGAAAGCACGCTGCTGATCGACGACAGCGACCCGTTCGCCTGGGGCATCCCGGCGCGATGA
PROTEIN sequence
Length: 312
MRQVHIIDSHTGGEPTRLVVDGFPDLGTGNMAERRALLASEHDAWRRATVLEPRGNDVIVGALLCQPVDPQCAAGVIFFNNESYLGMCGHGTIGLIASLAHLGRIGPGTHRIETPVGEVTTTLHEDGSVSVRNVPAYRLLADVRVNLSGHGTVTGDVAWGGNWFYLVSDHGLRVAVDNLAELTRFAALARDALEAAGIRGADGAKIDHVELFADDPGADSRSFVLCPGGAYDRSPCGTGTSAKLACLVARGRLAPGQVWRQASVIGSQFQAHYEMQGEQLIPTIRGRAWVCAESTLLIDDSDPFAWGIPAR*