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scnpilot_solids1_trim150_scaffold_41890_curated_2

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: comp(151..300)

Top 3 Functional Annotations

Value Algorithm Source
Vir-repressed protein n=2 Tax=Bordetella RepID=Q7W8H3_BORPA similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 5.30e-12
vir-18; vir-repressed protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 1.70e-12
Vir-repressed protein {ECO:0000313|EMBL:CAE37461.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 50.0
  • Bit_score: 77
  • Evalue 7.50e-12

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
ATGAGGCAATTATTGGGAATGCTGGCGGTCGTGGGTACCTTGCTGAGCGGATGCGCGGTGTACACGCCCAGCGGCGCCGTCGTGGTGGACAGTCCGCGAGGCGGGGGCAACTTCTGTCCGCCGGGGCAGGCCAAGAAAGGCAATTGCTGA
PROTEIN sequence
Length: 50
MRQLLGMLAVVGTLLSGCAVYTPSGAVVVDSPRGGGNFCPPGQAKKGNC*