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scnpilot_solids1_trim150_scaffold_11825_curated_2

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: comp(768..1817)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031715FE similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 298.0
  • Bit_score: 405
  • Evalue 6.00e-110
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24178.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 342.0
  • Bit_score: 547
  • Evalue 1.00e-152
livM; branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 323.0
  • Bit_score: 398
  • Evalue 2.30e-108

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGACCTCTGTTGTTTCGTCCGCGGCTGCGCCCGATCCGGGCACGGCCATCCACGACAGCCTGCGGCGCTACCGCCGCTCGGCCGACTGGAAGCCGCTGGAATATCTCTTCTGGTGCCTGCCTGTCGCGGCGTATTTCCTGTTTCCGGGCAACTACCTGCTGCTGAGCCAGATCGCGGTCACCAGCTTGTTCGCGCTCTCGCTCGACCTGATCTTCGGCTACGCGGGCATCATCTCGCTAGGGCACGCGGCGTTCTTCGGCATCGGCGCCTACACCGTCGGCCTGCTCGGCCTGCGCGGCATGGGCGATCCCCTGACCGGGCTGGTGCTGGCCGCGTTGTTCGCCGCGATCCTCGGGTTTCTCAGCAGCTTCCTGCTGTTGCGCGGCAGCGATCTGGCGCGGCTCATGGTGACGCTGGGCGTGGCGCTGATGCTCTACGAGCTGGCCAACAAGTTCAGCCGCATCACGGGCGGGGTCGATGGCATACCCGGCATCGAGATCAAGCCGGTGCTCGGGCTGTTCGAATTCGACCTGTACGGCCGCACTGGCTACATCTACGCGGTGGTGGTGCTGTTCGTACTGTTCTGGATCGCGCGGCGCATCGTGCATTCACCCTTCGGCCAGAGCCTGCGCGGTATCCAGATGAATGCGCAGCGCATGCCGGCGCTGGGCGTGCCGGTCAACCGGCGCCTGGTCGCGGTCTACACGCTGGGCGCGGCCTACGCGGGCGTGGCCGGAGCGATACTGGCGCAGACCAACCAGTTCGTTTCGCTCTCGGTGCTCGGTTTCGAGAATTCGGCCGATCTGCTGCTCATCCTCATCCTGGGCGGCACCGGGCGGCTGTACGGCGGGCTCATCGGCGCCATCGTGTTCATCGTCGCCAAGCATTTCCTGTCCGACCTGAACCCGCAGTACTGGCAGTTCTGGCTCGGCCTGGCGCTGGTGCTGCTGGTGATGTATGCGCGCGGCGGTATTCTGGGAACGGCGTCGAAATGGCTGGAAAAACGGCGCCAGCGCGCGCAGTCTCGCCCGGTGGGGGGTGCGGCATGA
PROTEIN sequence
Length: 350
MTSVVSSAAAPDPGTAIHDSLRRYRRSADWKPLEYLFWCLPVAAYFLFPGNYLLLSQIAVTSLFALSLDLIFGYAGIISLGHAAFFGIGAYTVGLLGLRGMGDPLTGLVLAALFAAILGFLSSFLLLRGSDLARLMVTLGVALMLYELANKFSRITGGVDGIPGIEIKPVLGLFEFDLYGRTGYIYAVVVLFVLFWIARRIVHSPFGQSLRGIQMNAQRMPALGVPVNRRLVAVYTLGAAYAGVAGAILAQTNQFVSLSVLGFENSADLLLILILGGTGRLYGGLIGAIVFIVAKHFLSDLNPQYWQFWLGLALVLLVMYARGGILGTASKWLEKRRQRAQSRPVGGAA*