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scnpilot_solids1_trim150_scaffold_30104_curated_1

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 1..1188

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraG n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KIK6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 395.0
  • Bit_score: 751
  • Evalue 5.00e-214
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CDM23738.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 395.0
  • Bit_score: 778
  • Evalue 4.10e-222
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 395.0
  • Bit_score: 743
  • Evalue 2.50e-212

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATCGAGTACGCCCAGCACTACTTCGCCAAGACGGAGCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCGAGAAGCGCGTGGTGGCGCTGGAGCAGTACCTCTCGCAGGCGCGCAACTATGACCCGGTGCTGGATGGCCTGCGCTCCGCCGTCCGCTACGACAAGACGTACTTCGACAAGATCGTCGCCAGCCTCCTGCCGCTGCTGGAGAAGCTCACCAGCGGCAAGATTTCGCAGCTCCTGGCTCCCAACTATTCAAACCTCAACGACCCCAGGCCGATCTTCGACTGGATGCAGGTCATCCGTAAGAGGGCCATCGTCTATGTCGGCCTGGATGCACTGTCCGACGCCGAGGTCGCCGCTGCGGTCGGCAACTCGATGTTCAGCGATCTCGTGTCGGTCGCCGGGCACATCTACAAGCACGGGATTGACGATGGCCTGCCGAGCGCATCGGCCGGTGCGCGCGTGCCGATCAATGTCCACGCCGACGAATTCAACGAACTCATGGGTGATGAATTCGTGCCGTTGATCAACAAGGGGGGCGGTGCCGGCCTGCAAGTCACCGCGTACACACAGACCCTCTCGGACATCGAGGCCCGCATCGGCAACCGCGCGAAAGCCGGCCAGGTGATCGGGAATTTCAACAACCTTTTCGTGCTGCGCGTGCGCGAGACCGCGACCGCTGAACTGCTGACCCGGCAACTACCGAAGGTCGAGGTCTATACGACCACCATCGTGAGCGGCGCGACGGACAGCTCGGACATCCGCGGGGCGACGGACTTCACCAGCAACACCCAGGATCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCGTCGCATGTCGTCGGCCTGCCCAAGGGCCAGTGCTTCGCACTGCTGCAGGGCGGCCAGCTTTGGAAAGTGCGCATGCCGCTGCCGGCGCCGGACCCGGACGAGGTGATGCCGGCAGACTTGCAGCAACTGGCCGGGTACATGCGCCAGAGCTACAGCGAAGCGACGCAGTGGTGGGAGTTCACCAGTTCCCCGGTCTTGCAGGACGCAGCCTTGCCCGACGACCTGCTGGACGATGCCGCTGCGCCCGGGCCAGACGTGGTGGCCACCACCACGGGCGACAACGCCGCCGACGAGGCTTCGCCATGA
PROTEIN sequence
Length: 396
IEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLEKLTSGKISQLLAPNYSNLNDPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYKHGIDDGLPSASAGARVPINVHADEFNELMGDEFVPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQVIGNFNNLFVLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPVLQDAALPDDLLDDAAAPGPDVVATTTGDNAADEASP*