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scnpilot_solids1_trim150_scaffold_268_curated_15

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(12422..13339)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UMR4_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 302.0
  • Bit_score: 506
  • Evalue 1.70e-140
Transcriptional regulator, LysR family, in glycolate utilization operon {ECO:0000313|EMBL:CDM22697.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 305.0
  • Bit_score: 587
  • Evalue 1.00e-164
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 300.0
  • Bit_score: 493
  • Evalue 3.50e-137

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGGCCGCTACACCGACATCAGCAGTTTTGTATTGATTGCCGACAAAGGCAGTTTCGCCGCGGCCGCGCTGGTGGAAGGCGTCACGCCGGTGGTCATGGGACGGCGCCTGACCGCTCTGGAGAAGCGTCTCGGGGTGCAGCTGATGCACCGGTCCACCCGGGGACTGGTGCTGACGGAACTGGGCGAGCGCTATCTGGAACAGTGTCAGCAGCTGATCCAGGATTTCGACAACGCGGATTCCAGCATCATGGCGCGGCGGCGCACCTTGAGCGGCCACCTGGTGGTGTCGGCGCCCGCGTCCTTCGGGCGCCTGCACGTGGCGCCGCACGCCCTGTCGTTTCGCCGCCGCTACCCCGATCTGGCGCTGTCCTTCAACTTCACCGACAGCGTGGTGGACCTGGTGCGCGAAGGCTACGACATGGCCATCCGCATCGGCGAAGTCACGGATCCGAACTACGTGGCGGTGCGCCTGTTTCCCAACCGGCGCGTGGTCTGCGGCACACCGGCCTATTTCGATTCGCACGGCGTGCCGCGCGTGCCCGAAGACCTGGTGCGGCACAACTGCCTGGCCTTCAATCTGCAGGGCGGCCAGCACCGCGGCTGGACCTTCGTGCGCGACGGCAAGCCCTTCGCCGTGCGGGTGCGGGGGGACCTGGCCTGCAACGATGGCGAACTGCTGTATCAATGGGTGCGGCAGGGGCTGGGCATCGGCTGGCGTTCCACCTGGGAAATCCAGCGCGAACTGAAGCGCGGCGAACTGGTGACCGTGCTGGACGAATTCGCGCTGCCCGCCTACGACATCCAGGCCGTCTACCCGCAGCAGCGGTATCTGCCGGCCAAGGTGCGCTATTTCATCGATGACCTTAGAAACCATTATCATGAGCCGGGTTACTGGGAAGGGCAGGGAAAATCTTGA
PROTEIN sequence
Length: 306
MGRYTDISSFVLIADKGSFAAAALVEGVTPVVMGRRLTALEKRLGVQLMHRSTRGLVLTELGERYLEQCQQLIQDFDNADSSIMARRRTLSGHLVVSAPASFGRLHVAPHALSFRRRYPDLALSFNFTDSVVDLVREGYDMAIRIGEVTDPNYVAVRLFPNRRVVCGTPAYFDSHGVPRVPEDLVRHNCLAFNLQGGQHRGWTFVRDGKPFAVRVRGDLACNDGELLYQWVRQGLGIGWRSTWEIQRELKRGELVTVLDEFALPAYDIQAVYPQQRYLPAKVRYFIDDLRNHYHEPGYWEGQGKS*