ggKbase home page

scnpilot_solids1_trim150_scaffold_39304_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 3..359

Top 3 Functional Annotations

Value Algorithm Source
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWJ8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 121.0
  • Bit_score: 118
  • Evalue 5.00e-24
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 117.0
  • Bit_score: 113
  • Evalue 3.80e-23
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEA45180.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 117.0
  • Bit_score: 113
  • Evalue 1.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 357
AAGGATCGCAGCATACCGGTGAATTGTCGCATAACCGGTAGAATTGATCAGGCAATGGTACCAGGCATGTACCTAAAAGCTTCTATAGAAACTGGCAGCAATCAGGTAACTGCACTTCCGGAAAAATCGGTTGTGAATTTCGCAGGGAAGAATTACATCTTTTTGCCCGAAGAAGTGGAGGCTGATCAAAACACTAAAAGCTATCGTTTCCGCATGGTTGAAATCCAGACCGGCGTAATGGAAAACGGCTATACAGAAGTAATTTTTCCACAGGGATTTAATGCACAAACTGAGATAGTCATTGACGGAGCATACGATCTGCTTTCTAAAATGAAAAATAGTGCTGAAGAGGAATAA
PROTEIN sequence
Length: 119
KDRSIPVNCRITGRIDQAMVPGMYLKASIETGSNQVTALPEKSVVNFAGKNYIFLPEEVEADQNTKSYRFRMVEIQTGVMENGYTEVIFPQGFNAQTEIVIDGAYDLLSKMKNSAEEE*