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scnpilot_solids1_trim150_scaffold_13831_curated_2

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 1133..1960

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV33_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 275.0
  • Bit_score: 286
  • Evalue 2.40e-74
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC00467.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 273.0
  • Bit_score: 312
  • Evalue 4.50e-82
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 275.0
  • Bit_score: 286
  • Evalue 7.70e-75

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Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGAAAAGAAAATATAGAAACACCGGTAGAGATTATTTACGAAAAGGTAAACGAATGTCCGCTACGGGATCGGGTCTACAGTTTCTTTCAGTTGGTTTTTGTTATCTCTGGAAATGGATATCAGACATTTAACGGAAATAGAAACAGCTATCAAACAAATGATCTATTTCTTATAACTCCCGACGATATACATACCTTTGACGTGGTTACGACCACCGAATTCCTGCTGATACGCTTTAACCGCTCTTATCTGAACGGATACGATTGGAAGAATTTGAACCATCTGGAATGTCTACTCAACAATGCAACAAACATAACGGGAAATATACTTAGGCATCAGTCAGACAAGATTATTGTAAAATCCCTGATAGGTACAATATTGCAGAGTATAGATAAATCCGATCTGTTCAATGAAGAACTAAGGAACTATTTGATCAACGCGCTGTTGGTTGTTGTAGCGAGAAGTATTTCTGGTTACCAGTTAGCTGACTTGCAGGAAAACTTTGACAAACGTTTCGTGAATATCCTCAATTACATTCACGATAACATTTATACCCCTGAAAAATTAAGGGCTATAACAATCAGTGAGCAGTTCAACATTTCGGAAAGCTATTTAGGACGTTTCTTTAAAGCGCAGTGTGGTGAAACTTTACAGGACTATATTTCAAAGTATAAAACAAAACTCATCAAAAACAGACTGAGATATAGCGACATGCGCATAAACGAAATTGCTGATGAATTTAATTTCAATGATGGAAGCCACATGAACAAATTTTTCAAAAAGCAATCGGGTATCAATCTGACCGCATATAGAAATCAGCTCTAA
PROTEIN sequence
Length: 276
MRKENIETPVEIIYEKVNECPLRDRVYSFFQLVFVISGNGYQTFNGNRNSYQTNDLFLITPDDIHTFDVVTTTEFLLIRFNRSYLNGYDWKNLNHLECLLNNATNITGNILRHQSDKIIVKSLIGTILQSIDKSDLFNEELRNYLINALLVVVARSISGYQLADLQENFDKRFVNILNYIHDNIYTPEKLRAITISEQFNISESYLGRFFKAQCGETLQDYISKYKTKLIKNRLRYSDMRINEIADEFNFNDGSHMNKFFKKQSGINLTAYRNQL*