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scnpilot_solids1_trim150_scaffold_23994_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 2..781

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5L8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 257.0
  • Bit_score: 296
  • Evalue 2.90e-77
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGE12702.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 257.0
  • Bit_score: 306
  • Evalue 3.90e-80
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 257.0
  • Bit_score: 286
  • Evalue 7.20e-75

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
TCTGTTACAAATTCAAACATGCAATCAGCACTTATTGTCCGAAGCCCGATTAACGGTACAATCAGCAATATATTCGCAAAAATTGGAAGTTATGTAGATGTTTCTTCTCCCATTGCCGAAATTGTAGACAACAATTCATTGCACCTCGATTTACAGGTATTTGAAAAAGACCTTCAAAAAATTTCAGTTGGTCAAACCATTGATTTTACATTGACCAACAATCCGGTAAAAACATACAAAGCAAAAGTATTCAGTATTGGTTCATCATTTGAAAATTCAAGTAAAACCATTGCCGTTCACAGTGAAGTATTAGGAGATAAATCCGGTTTGATTGATGGAATGAACAGCACTGCCATGATTAGTATAAACGATGTAACAATGCCGGCCGTTCCAAATGAAGCAATTGTTGAAGCAGATGGAAAGTACTATATCTTTATTCGAACCGCAAAACCAAATGACGGTCATGACCACAACCACGAGGAAGGCGACCATGACCACCAAGAAGATGGACATTCACACGACCACGGAGACAAAGGACATGCCCATTCAGATGGAGATGAACACCTGCACGACGAAGAGCACAATCACGATGAATTTGCAGCAGATAAAGGAGACCTATACTTCAAAAAAATTGAAGTGGCGAAAGGCGTTTCAAATATGGGCTATACAGCAATTACACCAGTAACAGACTTACCTCATCATGCACAAGTAGTTGTAAAAGGAGCATTCTTTATCAATGCAAAAATGAACAATACGGGTGAAGAAGGACACGCCCATTAA
PROTEIN sequence
Length: 260
SVTNSNMQSALIVRSPINGTISNIFAKIGSYVDVSSPIAEIVDNNSLHLDLQVFEKDLQKISVGQTIDFTLTNNPVKTYKAKVFSIGSSFENSSKTIAVHSEVLGDKSGLIDGMNSTAMISINDVTMPAVPNEAIVEADGKYYIFIRTAKPNDGHDHNHEEGDHDHQEDGHSHDHGDKGHAHSDGDEHLHDEEHNHDEFAADKGDLYFKKIEVAKGVSNMGYTAITPVTDLPHHAQVVVKGAFFINAKMNNTGEEGHAH*