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scnpilot_solids1_trim150_scaffold_993_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_993_curated_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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72..3407
DNA (3336bp) protein (1112aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y2B2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KGF83218.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_993_curated_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3510..4145)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_993_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4393..5187)
DNA (795bp) protein (265aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
hemin ABC transporter ATP-binding protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3DB4B
ABC transporter related protein {ECO:0000313|EMBL:AHG92537.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_993_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5188..6246)
DNA (1059bp) protein (353aa)
ABC transporter permease n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B56AF2
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG92538.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transporter permease; K02015 iron complex transport system permease protein
scnpilot_solids1_trim150_scaffold_993_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6370..7260)
DNA (891bp) protein (297aa)
ABC transporter substrate-binding protein n=1 Tax=Spirosoma luteum RepID=UPI00036F9B96
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG92539.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_993_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7497..8423
DNA (927bp) protein (309aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036804F3
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:AHG88294.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_993_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8467..9336)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000367F81A
Virulence factor family protein {ECO:0000313|EMBL:AHG87646.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
virulence factor family protein
scnpilot_solids1_trim150_scaffold_993_curated_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9375..11972)
DNA (2598bp) protein (866aa)
hypothetical membrane protein; K14205 phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACF5_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40182.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_993_curated_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12276..12848
DNA (573bp) protein (191aa)
Transcriptional regulator, PadR-like family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKR3_METSB
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AHG91188.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PadR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_993_curated_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13093..16131)
DNA (3039bp) protein (1013aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE80_GEMAT
hypothetical membrane protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
scnpilot_solids1_trim150_scaffold_993_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16225..16899)
DNA (675bp) protein (225aa)
Regulatory protein TetR n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FVY6_ISOV2
Regulatory protein TetR {ECO:0000313|EMBL:AHG93308.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
regulatory protein TetR
scnpilot_solids1_trim150_scaffold_993_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17073..17837
DNA (765bp) protein (255aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y9_GEMAT
Acetyl-CoA dehydrogenase-like C-terminal domain protein {ECO:0000313|EMBL:AHG87636.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 12 items

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