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scnpilot_solids1_trim150_scaffold_6141_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(1233..4130)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 952.0
  • Bit_score: 1503
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 952.0
  • Bit_score: 1503
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 952.0
  • Bit_score: 1503
  • Evalue 0.0

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2898
ATCCGCATCCATCCGCTGGTCTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTCAGCTACGAGGCGCAGATCGAGGCGAGAGTGCTGATGCTCTCGTCCAACAACATCCTCAAGCCGAGCGACGGTCGCCCGGTGGCCGAGCCGAGCCAGGACATCGTGCTCGGTTGCTACGTCGCCACGAAGGCGCCGAACGACCTCGAGACCCAGCTCCTCACGGCACCCAAGTATCGCACGGTGGCCGAGGTGGAGATGGCCATCGCGCATGGCGTCCTCACCCAACAGAGTCCGGTCCACTTCTGGGTGGAGGATGAGGAGGATGGGGCGCGCTGGGAGGGAACGACGGCCGGTCGGGTGCTGTTCAACGAGATCGTACCGCCGGCGCTGGGCTTCCAGAACCGGGACATGAAGAAGCGGGCTCTCTCCGAGCTCGTCTTCCAGTGCTACCGTCACGTCGGCCTGTCCGAGACGGTGAAGCTGCTGGATCGACTGAAGAACTTCGGCTTCTTCAACGCCACCCGTGGCGGCGTCTCCATCGGTATCGAGGATCTCCATATCCCGGCCGACAAGGAGGTCCTGCTCGTCGAGGCGACGGAACGGGTGGAGCGCTTCCAGCGCGCCTACCAGACCGGCAACATCACCAACGGCGAGCGGTACAACAAGGTCATCGATACCTGGACGCACGCGAACTCCGACATCGCCGACGCGATGATCAAGACGATGCGCGAGTCGCAGGGCGGCTTCAACCCCGTGTTCATGATGTTCGACTCCGGCTCCCGTGGAAGCCGCGACCAGATCCGCCAGTTGGCGGGTATGCGCGGTCTCATGGCCAAGCCGCAGAAGAAGCTCACCGGCGGCATCGGCGAGATCATCGAGAGTCCCATCCGGTCCAACTTCCGTGAGGGGCTGTCGGTGCTCGAGTACTTCATCTCCACCCACGGTGCGCGAAAGGGACTGGCGGACACGGCGCTCAAGACGGCCGATGCCGGTTACCTGACACGACGGCTGGTGGACGTGGCTCAGGACGTCACGATCTCCGAGGAGGATTGCGGTACGATCCTCGGCCTGGAGGTGAGTGCGCTGAAGGAGGGCGAGGACGTCATCGAGCCGCTGACGGAACGCATCATTGGCAACGTGGCTGCTGAGGACGTCGAGGATCCGCACGAGCGCGACGAGTCCGGTCGTCCCCGGGTGTTGATCGAGACCGGTCAGTTGATCGACGAGGAGACGGCGCAGGAGATAGAGGACTCGGGCATCGAGTCGATCAAGATCCGTTCGGTGCTCACCTGCGAGGCCAAGCGAGGCCTCTGCCGGATGTGCTACGGCCGGAACCTGGCGACGATGGCGATGGTCGACCTTGGCGAGGCGGTCGGCATCATCGCCGCCCAGTCCATCGGTGAGCCGGGTACGCAGCTTACCCTGCGCACCTTCCACATCGGCGGCACGGCTGCTCGCATCGCCGAGCAGACGGCGCGCAAGACGAAGGTTGCCGGAACGATCGAGTACGGAGACCGGCTGGTGCTCGTCACCAATCCGGAGGGACAGAGGATCGTCACCTCCTACGAGGGTGAGATCATCATCCGGACGTCGACCGAGAAGAACGCCGCGGTGGGCGCGCGCCTGCAGGTTCCGCTGGGCGCGATCCTGATGGTGGAAGACGGCCAGGAAGTGCGGCGTGACCAGGTGATGTTCGCCTGGGACCCGTACACCAACCCCATCCTTGCCGACGTCGAGGGAACGGTGAAGTTCGTGGACCTCGTGGACGACGAGTCGGTGTCCGAGGAGCTCGACGAGCTGACCGGACTGCGCCAGCGCGTGGTCATCGAGGATCGGGAGAAGAAGCTTCATCCGCACATCGAGATCTGGAGCAACATCGGGGGCAGCGACGAGCGCATGCGCGACTTCGTGATCCCGATCGGGGCCCAGCTCACGGTGACGGACGGGAGTCAGATATTCCCGGGCACGACGCTCGCGAAGATCGGCCGCGAGGCGTACAAGACGCGCGACATCACCGGTGGCCTGCCGCGAGTCGCGGAGCTGTTCGAGGCCCGTCGTCCGAAGGACCCGGCGACGATCTCGGAGGTGGATGGCGTGGTGCGCTTCGGCGACATCAAGCGCGGCAAGCGCGAGATCTTCGTGCAGCCGATGACGCAGATCAGCGGTCAGTGGACAGTGGATGAGACCCAGCCGGCGCAGCTCTATGAGGTGGCGGCTGGCAAGCACCTGCGCGTTCACGAAGGTGACCGTGTGCGGGCCGGTGACCGCCTGAGCGAGGGTCCGGTCAACCCGCACGACATCCTGCGGATCAAGGGCCCGCGGGCGGTTCAGGAGTACCTGCTGAACGAGGTTCAGGAGGTCTACCGACTGCAGGGCGTGAAGATAAACGACAAGCACATCGGCGTGATCGTCAAGCAGATGCTGCAGAAGGTACGCGTGCTCGATCCGGGGGACACCGAGTTCCTGGAGGGAGAGCATGTGGACAAGGGCGCCTTCCGCGACCAGAACGACAAGGCGAAGCGCAAGCGGAGTGTGCCGGCCGCAGCGGAACCACTGCTGCTCGGTATCACGAAGGCGAGCCTCACGACGCAGTCGTTCATCTCGGCAGCATCGTTCCAGGAGACCACGCGTGTTCTGACCGACGCCGCGATCCGCGGCGCACGGGACGAGCTGCGGGGGCTCAAGGAGAACATCATCATAGGGCACCTTATCCCGGCGGGAACCGGCATGTACCGGTACAACGACGTGGATCTGGAGGGGAGCGGGATGCCGATGCCGGAGCCACAGCCGGCGGTCGAGGATCCGATGCTACCCGGACTGTTGGGCTCGCCAGCGCTGGCGGAGTTCGGTTTCGCCAAGGGCGGAGCGGGCGACCTGTAA
PROTEIN sequence
Length: 966
IRIHPLVCAAFNADFDGDQMAVHVPLSYEAQIEARVLMLSSNNILKPSDGRPVAEPSQDIVLGCYVATKAPNDLETQLLTAPKYRTVAEVEMAIAHGVLTQQSPVHFWVEDEEDGARWEGTTAGRVLFNEIVPPALGFQNRDMKKRALSELVFQCYRHVGLSETVKLLDRLKNFGFFNATRGGVSIGIEDLHIPADKEVLLVEATERVERFQRAYQTGNITNGERYNKVIDTWTHANSDIADAMIKTMRESQGGFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIRSNFREGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVTISEEDCGTILGLEVSALKEGEDVIEPLTERIIGNVAAEDVEDPHERDESGRPRVLIETGQLIDEETAQEIEDSGIESIKIRSVLTCEAKRGLCRMCYGRNLATMAMVDLGEAVGIIAAQSIGEPGTQLTLRTFHIGGTAARIAEQTARKTKVAGTIEYGDRLVLVTNPEGQRIVTSYEGEIIIRTSTEKNAAVGARLQVPLGAILMVEDGQEVRRDQVMFAWDPYTNPILADVEGTVKFVDLVDDESVSEELDELTGLRQRVVIEDREKKLHPHIEIWSNIGGSDERMRDFVIPIGAQLTVTDGSQIFPGTTLAKIGREAYKTRDITGGLPRVAELFEARRPKDPATISEVDGVVRFGDIKRGKREIFVQPMTQISGQWTVDETQPAQLYEVAAGKHLRVHEGDRVRAGDRLSEGPVNPHDILRIKGPRAVQEYLLNEVQEVYRLQGVKINDKHIGVIVKQMLQKVRVLDPGDTEFLEGEHVDKGAFRDQNDKAKRKRSVPAAAEPLLLGITKASLTTQSFISAASFQETTRVLTDAAIRGARDELRGLKENIIIGHLIPAGTGMYRYNDVDLEGSGMPMPEPQPAVEDPMLPGLLGSPALAEFGFAKGGAGDL*