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scnpilot_solids1_trim150_scaffold_4945_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(410..1606)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH14_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 346.0
  • Bit_score: 323
  • Evalue 2.60e-85
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KFO66899.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 347.0
  • Bit_score: 342
  • Evalue 7.60e-91
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 346.0
  • Bit_score: 323
  • Evalue 8.20e-86

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Taxonomy

Smithella sp. SCADC → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGCAGACAGACTCAGCCGTCGACGCCATCCGTAACGCCGCCCTCCCACTCATGCAGCGGGTATACCTGGGGAACAGCCTCCGCGACTGGGTAGTCGCGGCGGTCACCTTCGCCGTGACCCTCAGCATCCTGCTCGCTGCGCGCTGGCTGGTCATCCGTCGGCTGGAGCCCATGTCGAGGCGCACCGAGACGCGCATCGACGAGTACATCGTCGCCCTGCTCGAGAACACGCGGTACAGCTTCCTGGTAATGCTCGCGCTGGGGCCGGCGCTCAAGCTGCTGGTGCTGCCCGAGCGCGTCTCGTCCCTCGTGATCCCGATGTTGCGCCTCGTCGTGATCATCCAGGTAGGGCTCTGGCTGGCCGAGCTGATAACGCTTCAGCTCCGTACGCTGACCAAGCGGCGGGCGGCGACCGACGTGGCCAGCGTGACGACGATCCGCGCTGCCGGATTGATCATCCAGTTGGTGCTCTGGGTGGTCATATTCCTGGTCATACTGCGAAACTTTGGCGTCGACGTCACGGCCCTCCTGACCACGTTGGGAATAGCCGGTATCGCTGCCGCGCTGGCGGTGCAGAACATCCTCAGCGACCTCCTGGCGTCGTTGTCGATCGTACTCGACAAGCCATTCGTCGTGGGCGACTTCATAGTGCTGGACGAATTTGCCGGGACAGTCGAGGAGATCGGGCTCAAGACCACCCGCCTGCGGTCCCTCTCCGGGGAGCGGCTCATCTTCTCCAATGGGGACCTGCTCAAGTCGCGCATCCGCAATTACAAGGACATGAAGCGGCGGCGGATCGTGTTCTCCTTCGGCCTGGACTTCGGTACGCCGCGCCAGGTACTGGAGAGAGTGCCCGAGGTTGTGCGGGAGGTCATCGAGGGCGTGGAGCAGGCCGCGTTCGACCGCAGTCACTTCCTCAAGTTCGGTGACTCCGCGCTGGTCTTCGAGACCGTCTACTTCGTCACGGTACCGGACTACACCATCTACATGGACGTCCAGCAGCAGATCAACCTGGATCTCTACGACCGTATCACGGAACTGGGTGCCAGCTTCGCCTTCCCGGTCCGCAGGCTGATCCTGGATCCGTCGCTGACGGAAGGACTGGGAGGGCGCAGCGAAGCTGGAGACAGGCAGCCAGCGCGGCTCGACCCCTCCATCCAGCCGGTCGGCCGGGATCCGGATGGAGGCATCGAGTAG
PROTEIN sequence
Length: 399
MQTDSAVDAIRNAALPLMQRVYLGNSLRDWVVAAVTFAVTLSILLAARWLVIRRLEPMSRRTETRIDEYIVALLENTRYSFLVMLALGPALKLLVLPERVSSLVIPMLRLVVIIQVGLWLAELITLQLRTLTKRRAATDVASVTTIRAAGLIIQLVLWVVIFLVILRNFGVDVTALLTTLGIAGIAAALAVQNILSDLLASLSIVLDKPFVVGDFIVLDEFAGTVEEIGLKTTRLRSLSGERLIFSNGDLLKSRIRNYKDMKRRRIVFSFGLDFGTPRQVLERVPEVVREVIEGVEQAAFDRSHFLKFGDSALVFETVYFVTVPDYTIYMDVQQQINLDLYDRITELGASFAFPVRRLILDPSLTEGLGGRSEAGDRQPARLDPSIQPVGRDPDGGIE*