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scnpilot_solids1_trim150_scaffold_1748_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 2554..3141

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 184
  • Evalue 1.20e-43
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 184
  • Evalue 3.80e-44
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 174.0
  • Bit_score: 219
  • Evalue 4.80e-54

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 588
GTGTCCGATTCCGAACTTGTCGCCAGTGTGCTAGGCGGAGATCCAGCCGCCGAACGTGCGCTCTACGAAGCGCACGTTGACCGGGTGTTCCGGCTGGCCTTCCGGATGACTGGTGATGACGAACTGGCCCAGGAGGTGGCGCAGGAAACGTTCATCAGGGCATTCCGTCAACTCTCCACTTTCGGAGGTCGAGCGGCGCTCTCCACATGGCTGCACAGCATCACTGTTTCAGTGGCGCTGAACGTGTTGCGAAAGGTGAAGCGGACGATGGCGAGGGAGGAATCACTGGATGAGGCGGCGTTGGCACACCATCCGGAGCGGCGGGCGGAACCGGACCTGACACAACGGCTCGGTGCGTCGATCGCCGCCCTTCCCACGGGCTACAGGACTGTCTTCGTGATGCACGACGTGGAGGGGTACACGCACGAGGAGATAGGAGCTGCACTCGGCATAGAGAGTGGCACGTCGAAAGCCCAGTTGTCGCGGGCGCGCGCAAGGCTGCGCGAGGCGTTGCGCCCATTCCGGGATCACGAGCCCACCGCCACCCCGGCAGTGGGCATTGCCACCCCGCAACGGGGGGCCATCTGA
PROTEIN sequence
Length: 196
VSDSELVASVLGGDPAAERALYEAHVDRVFRLAFRMTGDDELAQEVAQETFIRAFRQLSTFGGRAALSTWLHSITVSVALNVLRKVKRTMAREESLDEAALAHHPERRAEPDLTQRLGASIAALPTGYRTVFVMHDVEGYTHEEIGAALGIESGTSKAQLSRARARLREALRPFRDHEPTATPAVGIATPQRGAI*