ggKbase home page

scnpilot_solids1_trim150_scaffold_3859_curated_1

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2..1840)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDE40F related cluster n=1 Tax=unknown RepID=UPI0003CDE40F similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 360.0
  • Bit_score: 636
  • Evalue 2.80e-179
Lactate dehydrogenase {ECO:0000313|EMBL:EZQ12913.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 361.0
  • Bit_score: 711
  • Evalue 9.60e-202
putative restriction-modification (R-M) enzyme similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 359.0
  • Bit_score: 615
  • Evalue 1.60e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGGAGCGAGTCACGTTGTCCGAAGACGGCCTGCCTGCCTTCCCGCTGGACATTCTCCAGCCCGCCGATACCCAGGCGCTCGTGCCAGCGCTGCTCGATACCCGTACCCCCAATGTCTGGGTGTATCGCTACACCCACCCCGACCTCGGCTGGCTTCTCAGCATCGCCACCCACGGCGAGCCGGGCTCGAACAAGCTCTCGCTCGGCGGCTTCCGCATCGCGCCGGCTGCCCGGGTGGAGTCGCCGGGCTACGACAACGACGCCGAGGCAATCGGACTGGCAATGGGCATGGAGGAGAAGGTGCACTGGTCGCGGGTCATCCGTGCTGGCGGACCGCTGGCCCGTGCGCACGTGAGCCAGTTGGTAGGTGGCAAGTGCGTGCTCCATCCCACGGTCGATTCGCGGGTCGGTCAGCCTCGTGATTTCCAGATGCTGGACTGGGCGCTGGCCTGCTTCAGGGATTTCGAGCGGGCTTCGGGCGTACGCCTGAACACTGGCCAGGACCTGGGTCACGGCGTGATGTCCGACGGCAGGACGCGCTCGCTGGACTACCTGGGACGCGGTTTCCACGGCTGCGTCTTCTCCGATACGTCGCGCCCCACCGGTGAGGGGAACTTCTACATCGTGAAGGGAATGCTCGATGCACTCGACATTCCCCTGGACAGGGCGCGCATCGGACTGATTGGCTGCGGCAACATTGGCGACTGGGTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCGAGGGACCACCCCAGCCCGGTGATGACATTCTTCTTTCCGTTATCACCGATGGCCGCCACGCTGCGATCGACCTGCGTCTCGTCGATCCAGACAATGACAATGAGCCGGACAACAAGCTCAACGATCTCGTCGGCAATGCGTATCGCATCTGGCAGGAAACCTCGGACGACGCCTATGTGCGTCCCGACGGCAAGTCCTTCGAGCTAACTGGCGCCGCGCAGATGATTTTTTCCGATCTCGGCACGATCAGCGTTGAGAAAAGCCGGGGCTTCTCGGCCTATCGATGGATCAGGGACGAACTGGTCCGCATGGGCGTTTCCCCTGCCGAAATCGCCTTCATGCAGGACTTCAAGAAATCGGAGGCCAAGCAGCGCCTGTTCGGCGATGTCCGCGCCGGCAAGGTACGCTTCCTGATCGGCTCCTCGGAGACGATGGGGACCGGCGTTAATGCTCAACTTCGCCTTAAGGCGCTGCACCATCTCGATGTGCCCTGGCTGCCCTCGCAGATCGAGCAGCGTGAGGGACGCATCATGCGCCAGGGCAACCAGCACGACGTCATCGACATCTTCGCCTACGCCACCGAAGGGTCCATGGACGCGCAGATGTGGCAAAACAACGAGCGAAAGGCCCGTTTCATCGCCGCCGCGCTTTCGGGCGACACCTCGATCCGTCGGCTGGAGGATATGGGTGAGGGGCAGGCGAACCAGTTCGCCATGGCCAAGGCAATTGCGAGCGGAGATCCGCGCCTGATGCAGAAGGCGGGGCTCGAGGCCGACATCGCCCGGCTCGAAAGATTGAGGGCTGCGCACCAGGACGATCAGTTCGCTATCCGCCGCCAGATCCGCGATGCCGAGCGCGACATCGAATATTCGACCCGGCGCATTGGCGAGATCGGCCAGGATATCGAACGGCTGGTTCCAACCGGTGGCGATGCCTTTCACATGCGTGTCGGCGACGAGATTTTCGTCGAGCGCAAGCTCGCCGGTCGGGCACTGATGAAGGAAATCCTGACCCTGGTGCAGCTCCAGCAGGAAGGCGATAGCTCGATTGCCTCCCTTGGTGGGTTCGACCTCGAA
PROTEIN sequence
Length: 613
MERVTLSEDGLPAFPLDILQPADTQALVPALLDTRTPNVWVYRYTHPDLGWLLSIATHGEPGSNKLSLGGFRIAPAARVESPGYDNDAEAIGLAMGMEEKVHWSRVIRAGGPLARAHVSQLVGGKCVLHPTVDSRVGQPRDFQMLDWALACFRDFERASGVRLNTGQDLGHGVMSDGRTRSLDYLGRGFHGCVFSDTSRPTGEGNFYIVKGMLDALDIPLDRARIGLIGCGNIGDWVXXXXXXXXXXXXXXXXREGPPQPGDDILLSVITDGRHAAIDLRLVDPDNDNEPDNKLNDLVGNAYRIWQETSDDAYVRPDGKSFELTGAAQMIFSDLGTISVEKSRGFSAYRWIRDELVRMGVSPAEIAFMQDFKKSEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIMRQGNQHDVIDIFAYATEGSMDAQMWQNNERKARFIAAALSGDTSIRRLEDMGEGQANQFAMAKAIASGDPRLMQKAGLEADIARLERLRAAHQDDQFAIRRQIRDAERDIEYSTRRIGEIGQDIERLVPTGGDAFHMRVGDEIFVERKLAGRALMKEILTLVQLQQEGDSSIASLGGFDLE