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scnpilot_solids1_trim150_scaffold_17735_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 1410..1871

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 237
  • Evalue 7.30e-60
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 237
  • Evalue 2.30e-60
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 237
  • Evalue 1.00e-59

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 462
ATGCCAACGCAGCCAGAGCTCACCAACCTTCCCGACGCCGAGATCGTAGCCCTGGCACGCCAGGGTCGCGATCGCGCGTTCAGGGAGTTGGTCCGGCGCTATGAGCGACCGGTGTTCTCGCTCATCTACCGGATGGTGCGTGACCGCGAAGCCGCCGAGGACCTCGTCCAGGACAGCTTCGTGAAAGTACTCAACCACCTCGATCGCTACCGCCCCGAATTCAAGTTCTCGAGCTGGATCTTCAAGATTGCGAACAACGTGGCGATAGATCACCTGAGGAGGCGGCAGTTGAACACGGTGAGCATCGACGGCTCCCCGCACGCCGCCAGCGTCGCCGAGGCGACCGCCAGTTCCCTTGACCTGGCGTCCCGCCAGGAGAGCGCTCTGGAAGAGATGGAGGCCCGGGAGATTGGCGGCGCGATCGAGGAAGCCATTGCCGGCCTCCGCCCGGAGTACCGTTCC
PROTEIN sequence
Length: 154
MPTQPELTNLPDAEIVALARQGRDRAFRELVRRYERPVFSLIYRMVRDREAAEDLVQDSFVKVLNHLDRYRPEFKFSSWIFKIANNVAIDHLRRRQLNTVSIDGSPHAASVAEATASSLDLASRQESALEEMEAREIGGAIEEAIAGLRPEYRS