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scnpilot_solids1_trim150_scaffold_18215_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(1037..1399)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL20_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 119.0
  • Bit_score: 198
  • Evalue 5.00e-48
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 119.0
  • Bit_score: 198
  • Evalue 1.60e-48
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 119.0
  • Bit_score: 198
  • Evalue 7.00e-48

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 363
ATGCCTCGCGTCAAATCGAACGTTGTCCGCCTGAAGCGGAAGAAGCAGGTAATGAAGGCCGCCCGCGGCGCCTTCGGCGGCCGCAGCAAGCTCTGGAAGGCAGCCAAGGAGAATGTCGAACGCGGCTGGCGCTATGCCTACCGCGATCGCAAGAACAAGAAGCGGGAGTTCCGTCGCCTGTGGATCGTCCGCATCAACGCGGCCGCCCATCAGAACGACATGTCCTACTCGGTCTTCATGAACGGCCTCAACAAGGCCGGGATCGAAGTGGATCGGAAGATCCTGGCCGATCTCGCGGTCTCCGATCCTCAGGCATTCGCGTCGCTGGCCGATCAGGCTCGCGCCGCCCTCTCCGCTGCCTGA
PROTEIN sequence
Length: 121
MPRVKSNVVRLKRKKQVMKAARGAFGGRSKLWKAAKENVERGWRYAYRDRKNKKREFRRLWIVRINAAAHQNDMSYSVFMNGLNKAGIEVDRKILADLAVSDPQAFASLADQARAALSAA*