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scnpilot_solids1_trim150_scaffold_5653_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(3479..4267)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthetic protein FliR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A548_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 251.0
  • Bit_score: 233
  • Evalue 2.30e-58
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:AHG87739.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 246.0
  • Bit_score: 259
  • Evalue 4.30e-66
fliR; flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 251.0
  • Bit_score: 233
  • Evalue 7.40e-59

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 789
GTGCTTCAGGCACCCCCCTTCGATCTCTTCGCGCCCGGCGCGGGGAGCCTCATCGCCCTCTGCGGAGCGCGGGTGAGTGGGCTCCTGCTCGTCGCTCCCGTCTTCTCCGCGCGCATGGTTCCGCCCATGGTGAAGGCGGGACTGATCGTGCTGCTCACCGTGCTCATGGTGCCGGTGGCCACGGCGCACCTCCCGGTCGCCCCGGAACTCACCCCCGCGACGGTGCTGGGCGAGACGCTCGTCGGTTTCGTCATCGGCCTGGGCGCGGCGCTGCTGGTGGGCGCGGCCGAGGCGGCGGGTGAGCTGATGGCCATCCAGATCGGACTCTCCGGAGCGTCCATCATGGACCCGGTCAACCAGCACCAGGTGCCGGCGCTCGGGCAGTTCATGCAGCTCACGGCGATCGCCCTCCTGCTCGGGCTCGACCTCCATCTCGTCATGCTCGACGCCGTGGCCGCCAGCACACGACTGCTCCCGATAGGCATGGAGATGGATCTCGCCGGTGGCGCGAGGGCCATGGTCGGCCTGGGAAGCACGCTCTTCCTGCTCGGCCTCCGCTTCGCCGCACCGGTGGTCGCCTCAGTGCTCATCGCCAACGTCGCCCTGGCGGTCCTCAGCCGCGCCGCGCCCCAGCTCAACGTGCTCTCCGTAGCCTTCCCGCTGCAGATCGGCGTCGGGCTGTTCGCGCTGGCCGCCTCCATCCCCCTCATAGCCACCTTCTTCACCAACTGGTCGACGCCTTACGACGACATGGTGGGCAGGGTGCTTCGCGTGCTGGGAGGCGGCTGA
PROTEIN sequence
Length: 263
VLQAPPFDLFAPGAGSLIALCGARVSGLLLVAPVFSARMVPPMVKAGLIVLLTVLMVPVATAHLPVAPELTPATVLGETLVGFVIGLGAALLVGAAEAAGELMAIQIGLSGASIMDPVNQHQVPALGQFMQLTAIALLLGLDLHLVMLDAVAASTRLLPIGMEMDLAGGARAMVGLGSTLFLLGLRFAAPVVASVLIANVALAVLSRAAPQLNVLSVAFPLQIGVGLFALAASIPLIATFFTNWSTPYDDMVGRVLRVLGGG*