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scnpilot_solids1_trim150_scaffold_10579_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2202..2714)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=2 Tax=Rhodanobacter RepID=I4WNC0_9GAMM id=5223544 bin=16ft_combo_ws3_JS1 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 1.10e-43
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 166
  • Evalue 5.50e-39
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 1.50e-43

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 513
ATGGTGGAGCACCTGCTCGCCATCGGACACAGGCGTATTGCCTTCATCCGGGGCGCCGCGCGCAACCATGACGCACGCGAACGGCTCACTGGCTATCGCGCCGCGCTCCGCGCCGCCGGCATCGCCCGGGAAGCCGAGCTGGAACTGGCTGGCGACTTCACTGAGTCGGGCGGGCATGCAGCAGCTTGCGCTGCCCTGCGACTTCGCCCACGGCCCACGGCCATCTTCGCCGCCAATGACGCGATGGCGTTGGGCGCGCTAAGCGCGGTTCGTCAGCACGGAATGCGCGTGCCCGACGATATCGCCGTAGTCGGCTTCGACGACATACCCGTCGCCCGCTACCTCACGCCGCCGCTGACCACCGTGCAGGTCGGCATCAGTGCCCTCGGCGAGCGGGCGGCCACCATCCTGTTGCAGATGCTTTCCGGAGACGGCCCGCCGTCGCCCGTCCACGCCGTCCTGCCCACCTCTCTCGTGGTGCGTGCTTCATGCGGCGCATCCGGCCAGGGCTGA
PROTEIN sequence
Length: 171
MVEHLLAIGHRRIAFIRGAARNHDARERLTGYRAALRAAGIAREAELELAGDFTESGGHAAACAALRLRPRPTAIFAANDAMALGALSAVRQHGMRVPDDIAVVGFDDIPVARYLTPPLTTVQVGISALGERAATILLQMLSGDGPPSPVHAVLPTSLVVRASCGASGQG*