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scnpilot_solids1_trim150_scaffold_6356_curated_1

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2..469)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:AKF82454.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 153.0
  • Bit_score: 77
  • Evalue 1.40e-11
RNA polymerase, sigma-24 subunit, ECF subfamily id=2323539 bin=GWA2_Elusi_like_61_42 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 160.0
  • Bit_score: 75
  • Evalue 6.30e-11
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 149.0
  • Bit_score: 73
  • Evalue 7.60e-11

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGACGAAAGCTGAATTTGCAGATTTCCAGGCGGGAGATCACGGCGTGTTTCATGTGCTCTATCGACGCCTCCAACCCGCCCTGACCGCCTACGTGGCCGGTTTCATACGTGACCAGGACCAGCGAGACGACGTACTCCAGGATATCTGGCTCCGCATCTTCACCCGTCGCGCCTCGTACCGGTCTAACAACTCCTTCCAGGGCTGGGCATTCACCATCGCGCGAAACGTCTGCCTCATGCGTCGTCGCGCGGCTGCCAGGTCACGCATGGTTCATAAGCCTGACGGATATGCCGACACGTGCGCGGCGGAGCCACCACCCGGGCCGGAGAAAGCGGAAGATGATCAGCGCACGGCCGCTCCGACGCTGATGGTCTTGCAGGCCCTGTCCGCCCTCCCCGAGTGCGAACGGGCCGTCGCCCGCCTCCGCTGGATTCACGGCAGGTCGCTGGCGGATATCGCTGCCGAT
PROTEIN sequence
Length: 156
MTKAEFADFQAGDHGVFHVLYRRLQPALTAYVAGFIRDQDQRDDVLQDIWLRIFTRRASYRSNNSFQGWAFTIARNVCLMRRRAAARSRMVHKPDGYADTCAAEPPPGPEKAEDDQRTAAPTLMVLQALSALPECERAVARLRWIHGRSLADIAAD