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scnpilot_solids1_trim150_scaffold_6356_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2489..3253)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A543_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 246.0
  • Bit_score: 321
  • Evalue 1.10e-84
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 247.0
  • Bit_score: 336
  • Evalue 2.70e-89
fliA; RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 246.0
  • Bit_score: 321
  • Evalue 3.40e-85

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 765
TTGGACATGTCGGATACATGGCGTGCCGTGGCCGGCGGCGATGACGCCGCTCGCGAGCGACTCCTTACCGAGCATCTGGGCCTGGTGCACTTCGTGGCCCGTCAGATCGCGCGCGGTATCAGCGTCGAGGCCGACTTCGACGAGCTGGTGAGCGCCGGTACTATCGGCCTCATGAGCGCGCTCAGCAGCTTCGACAGCGGACGCGGGCTTGCCTTCAGCACCTTTGCCGCGCCGCGCATTCGCGGCGCCATACTGGACGAGCTGCGTCGTCAGGATCACGTACCGCGTTCGGTGCGTCGCAAGGCACGCGAGCTCGGCAACGCCCGCGACGCCCTCACCCGCACCCTGGGTCGTGCTCCCGAGACGAGCGAGATCGCCGAGCATCTGGGCGTGGACATGGACACGCTATGGCGCTGGCAGGGCGAGGTGGAGACCAGCGTCCGACTGCCACTCGACCGTCCGGCCACCGACGGCGGTGCACCCAGCCCCGCTGAGACGCTGTACAGCGAGGACGAACGCGGCATCGAGGATCTGCTCACGCACGAGCAGGAAGTGGAGATTCTGCGTGATGCGATCATGGGACTAAAGGAGCAGGAACGCACCGTGCTGGCCATGTACTATTTCGAGGAACTCAAGCTGCACGAGATCGCGACGGTGCTCGAACTCACGGAGAGCCGGGTGTCGCAGATCCGCTCGAAGGCGATCCTGCGGTTACGGGAGAAGATGGCGCCGTTGCGTCAGGAGCCGGCCGGGATCCGGGGGTAG
PROTEIN sequence
Length: 255
LDMSDTWRAVAGGDDAARERLLTEHLGLVHFVARQIARGISVEADFDELVSAGTIGLMSALSSFDSGRGLAFSTFAAPRIRGAILDELRRQDHVPRSVRRKARELGNARDALTRTLGRAPETSEIAEHLGVDMDTLWRWQGEVETSVRLPLDRPATDGGAPSPAETLYSEDERGIEDLLTHEQEVEILRDAIMGLKEQERTVLAMYYFEELKLHEIATVLELTESRVSQIRSKAILRLREKMAPLRQEPAGIRG*