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scnpilot_solids1_trim150_scaffold_12598_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 2166..2378

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 3.70e-27
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 1.20e-27
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 70.0
  • Bit_score: 133
  • Evalue 1.60e-28

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Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCGTACGACCGGCACCGTGAAGTGGTTCAACGACGCCAAGGGCTTTGGTTTCATCACGCCTGAGGACGGTGGCAAGGACCTGTTCGTCCATCACTCAGCGATCCAGGGCCAGGGCTTCAAGTCCCTCGCCGAGGGTGAGCGCGTGGAGTTCGACGTGGTTCAGGGCCAGAAGGGCCCGGCCGCCGAGAACGTGACCAAGCTCGGTCACTAG
PROTEIN sequence
Length: 71
MRTTGTVKWFNDAKGFGFITPEDGGKDLFVHHSAIQGQGFKSLAEGERVEFDVVQGQKGPAAENVTKLGH*