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scnpilot_solids1_trim150_scaffold_1755_curated_8

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 4175..5764

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000255|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000255|HAMAP-Rule:MF_01884}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 481.0
  • Bit_score: 592
  • Evalue 5.60e-166
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 481.0
  • Bit_score: 592
  • Evalue 4.00e-166
transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 481.0
  • Bit_score: 592
  • Evalue 1.30e-166

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1590
ATGACCGAACGTCGCCGTCCCCACCGCCGCGGCCGCGGCCCCCGTCCGTCTGGCCGAGCTGGAGCCGAACCCACACTCGATGAGACGAACCCTTACCGTGACGCAGACGATGCGCCCAGCGGCGACGCCGGAGTGACCGTCCGCACGGACACCGAAAGGGCCGCGCCAGTCCCGACTGGTGGCGATGGAGATGGACCTCCAGCCAACGATACCGCGCCAGCGGCAGAGCCGACGCCGCGCGCAGAGTCGCCACGGGAGAGCGCACCGCGGGAGTCGGCCATACGCGATACCACCCGGCGCGACAAACGCGGCCGCCCGCCGCGCGACCATCGGGAACAGCGTGACAGCCGGACGGACGGCAAGGATGCCCGGGATGAAGGCAGCCGGCGACGTCGCGGACAGAGCGGTCGCCGACGCGGTCGCGCACCGCGCGGCGGTGACCGGCAGCAGGCGCCGGATCGGGTGCCCGGCCAGCCGCTGGGCGTGGATGGTGAGACAACGGGCTGGTTCGATCCGGCGCGCGACGGCGGCTATGTGCGCCTCGCCGAGAACAGCTACCTGTCGGACCCGGGCGATACCTTCGTGCCGGCGGCGCTTGTGCGCTCGGCCGGCCTGCGGCGCGGCGACCTGGTCACTGCCACTTTCGGCCGCGACAACCGCGGACGGGCCGTCGTTGCCGACCTGCTGACGGTCAACGGTGGTGAGCCGGGTACGGCCGACCGGCCCGAATTCAGTACCCTCACGGCGTCGTACCCGGAGCGCAAGCTCTTCCTGGAGACGGGAGCACCGGCCAGGAGCGGACCCGAACTCACTCGCCGGGCAATAGACATCATCGCGCCGATCGGGCATGGACAGCGCGCCCTGATCGTGGCCCCGGCACGGGCCGGCAAGACAATGCTCCTCCAGGCCATCGTCCAGGGAGTGGCCACCAACCATCCCGATGCTGCCCTCTTCGTGCTGCTCGTCGACGAGCGCCCGGAAGAGGTGAGCGAGATGATCTCGTGGGGCTATGGCGAAGTGGTCGCATCCAGCTTCGATCAGCCTGCCGAGCGGCACACCAGCGTTGCCGAGATGGTGCTCGAGCGCTCCCGCAGACTTGTCGAGATGGGGCAGGACGTGGTCATCGTACTCGACTCCATCACTCGCCTCGCCCGTGCCTACAACACAGTGGAGCGCGGTACCGGCCGGACTCTCTCCGGCGGCCTGGACGCACAGGCGATGGCCAAGCCGAAGGCGTTCTTCGGTTCTGCCCGCGCGGTACTGGATGGCGGGTCACTGACCATCATCGCGACGGCTCTCGTGGAGACGGGATCGCGGATGGACGACGTGATCTTCGAGGAGTTCAAGGGAACCGGCAACTGCGAGATCAAGCTCGACCGTTCGCTTGCCGAGAAGCGGATCTTTCCGGCCATCGACATCGCGACGAGTGGGACGCGACGGGAGGAGAAACTCTTCCGGCCAGACCAGTTGGACGCGGTCTTCACGTTGCGCCGCGGACTGCACCAGATGCCACCGCAGTCTGCGATGGAATGGTTGATCAAGCGCATCGCCGGCACACCCAACAACGACGCGCTGCTGGACGGGCTCTGA
PROTEIN sequence
Length: 530
MTERRRPHRRGRGPRPSGRAGAEPTLDETNPYRDADDAPSGDAGVTVRTDTERAAPVPTGGDGDGPPANDTAPAAEPTPRAESPRESAPRESAIRDTTRRDKRGRPPRDHREQRDSRTDGKDARDEGSRRRRGQSGRRRGRAPRGGDRQQAPDRVPGQPLGVDGETTGWFDPARDGGYVRLAENSYLSDPGDTFVPAALVRSAGLRRGDLVTATFGRDNRGRAVVADLLTVNGGEPGTADRPEFSTLTASYPERKLFLETGAPARSGPELTRRAIDIIAPIGHGQRALIVAPARAGKTMLLQAIVQGVATNHPDAALFVLLVDERPEEVSEMISWGYGEVVASSFDQPAERHTSVAEMVLERSRRLVEMGQDVVIVLDSITRLARAYNTVERGTGRTLSGGLDAQAMAKPKAFFGSARAVLDGGSLTIIATALVETGSRMDDVIFEEFKGTGNCEIKLDRSLAEKRIFPAIDIATSGTRREEKLFRPDQLDAVFTLRRGLHQMPPQSAMEWLIKRIAGTPNNDALLDGL*