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scnpilot_solids1_trim150_scaffold_2506_curated_5

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 3261..4304

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV pilus assembly protein PilM n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 347.0
  • Bit_score: 458
  • Evalue 5.90e-126
pilM; putative type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 347.0
  • Bit_score: 458
  • Evalue 1.90e-126
Putative type IV pilus assembly protein PilM {ECO:0000313|EMBL:BAH39560.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 347.0
  • Bit_score: 458
  • Evalue 8.30e-126

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1044
ATGATCTCATTCGGCCGCAAGAAGGTCACCGTCGGTCTCGACATCGGCTCGGGACTAGTCAAAGTAGCCGTTATCGAGCATGGGCGAGGCGAGCCGGAGCTCGTCCGCGTCGCGATCTCGCCGCTCATTGCCGACGCCATCGTGGAAGGTGAGGTCATGGACCCGGCGCTCGTCAGCGAGGCGGTCCTCGCTGCCCTCGAGCAGGCTGGCGTTGTCAGCAAGGATGTCGTGACCGCAGTTGGCGGACGCGATGTCATCATCAAGAAGATCCAGATCGAGCGAGTGAAGGAGCAGCAGGCGCGTGAGCTCATGCGCTGGGAAGCGGAGCAACACGTGCCGTTCGACATGGAATCGGTTGAGCTGGATTTCCAGATCCTGGATCCGGACGGCGATGGCCTGGAGATGAGTGTTCTGCTGGTGGCCGCCAAGCGCGATCTGGTGGAGCACAAGATCCGGCTCCTCGGTGATGCTGGCCTCACGGCACGCGTCGTGGACGTGGATGCGTTCGCGCTTCACAATGCGTTCGAGGTCAACTACCCCGACGCGATGCACGGCATCGTGGGCCTGATCAGCGTTGGCAACGAAGTCACGACGGTCAACATCCTCGAGGAGGGGATTCCGGTTCTTACCCGGGATCTGCCGATCGGCACGCGCCGCATGCGCGAGGATCTGCAGCGTGACTGCGGACTCAGCGCCGACGACGCGGCAGCCCTGTTGCAGGGCCATGACCAGACGCCGGAGCTGCGCCCCATCGCCGAAGCGCGCGGCGAGGAGATCGCGGTAGGTGTCGAGCGCGCCGTCGCCTACCTGGCCCAGTCCTCCCGTTCGACCAACCGGCTCCGCGCCGTCTACACCTGCGGCGGGGGAGCCCGCGTGCCTGGTCTCACCGAGGCGCTCGCCGCAAGACTCCGCGTTCCCGTCGAGCAGGCCAGCCCGCTCACCAGGCTCAAGGTGCGTGACGGCGCGCTCGCATCGCTCGTCACCGACGAGGTTGCACCCCTTCTGATGCTCCCGATCGGGCTCGCTCTCCGTACGGCCGCCTGA
PROTEIN sequence
Length: 348
MISFGRKKVTVGLDIGSGLVKVAVIEHGRGEPELVRVAISPLIADAIVEGEVMDPALVSEAVLAALEQAGVVSKDVVTAVGGRDVIIKKIQIERVKEQQARELMRWEAEQHVPFDMESVELDFQILDPDGDGLEMSVLLVAAKRDLVEHKIRLLGDAGLTARVVDVDAFALHNAFEVNYPDAMHGIVGLISVGNEVTTVNILEEGIPVLTRDLPIGTRRMREDLQRDCGLSADDAAALLQGHDQTPELRPIAEARGEEIAVGVERAVAYLAQSSRSTNRLRAVYTCGGGARVPGLTEALAARLRVPVEQASPLTRLKVRDGALASLVTDEVAPLLMLPIGLALRTAA*