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scnpilot_solids1_trim150_scaffold_3195_curated_7

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(5677..6294)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC29_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 172.0
  • Bit_score: 241
  • Evalue 6.70e-61
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89651.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 224.0
  • Bit_score: 246
  • Evalue 3.80e-62
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 172.0
  • Bit_score: 241
  • Evalue 2.10e-61

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 618
ATGGACGCCGACACGCAGATCATCCGACTCGCCTGTGCGGGGGACGAACGGGCCATGCGGACACTCTGGACGCAGTACGGTCCGGTGGTGGACGCCGTGGTGCGTCGGATGGTGGCCGATCCGGATCAGGCAGCGGATGCCGCGCAGGACGTCTGGATCCAGATCTTCCGCGCCCTGCCCAGCTATCGCGCCGAGGCCCAGTTCTCCACCTGGGTGCATCGTATCGCTGTCAACCGGACACTCAATGCGTTGCGTCGATCGCGCCGTCTGGATCGCATCGAGACGGAGATCACCGAGGACAGCGCCTCGGTGGAGCCGGAGGGAGACCGGGCGCTCCTCGCTGCCAGCATCGACGAAGCGGTCGCCCAGCTTCCCACCGGAGCGCGGACCGTCTTCCTTCTCCATGACGTGGAGGGTTACACGCACGAGGAGATCGCCGCCGAGCTCGGCATCACTGCTGGCGGCTCGAAATCACAACTCTTCAAGGCTCGCGTTCGCCTCCGCAAGTTGCTCGCTCACCATCGCCAGCCCGACCCCGATCCGGGCGACGTTGCCACCACCTCTTCCGAATACAACCTGCGATTCTCGCTGCCGAACCATGCTTCCTCCATCTGCTGA
PROTEIN sequence
Length: 206
MDADTQIIRLACAGDERAMRTLWTQYGPVVDAVVRRMVADPDQAADAAQDVWIQIFRALPSYRAEAQFSTWVHRIAVNRTLNALRRSRRLDRIETEITEDSASVEPEGDRALLAASIDEAVAQLPTGARTVFLLHDVEGYTHEEIAAELGITAGGSKSQLFKARVRLRKLLAHHRQPDPDPGDVATTSSEYNLRFSLPNHASSIC*