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scnpilot_solids1_trim150_scaffold_4604_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 1213..2370

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit id=24575776 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 373.0
  • Bit_score: 233
  • Evalue 4.50e-58
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 344.0
  • Bit_score: 203
  • Evalue 9.20e-50
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 353.0
  • Bit_score: 232
  • Evalue 1.10e-57

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1158
ATGTTTTTCCATCGTGATCCCCTCGCACCGCGAGGTGCCAGGCGCCGCACGGGCCTGTCCGTGGCCGTGTTGACTGTTGCCGCTCTCTCCGCTGCCTGCAGCGGTGCAGAGCCTCCGGCGACACAGACGGCGCAGCCGGGGGGGCGCCGTGGTCCTCAGGTCGTTCCCGTTACCGTCACGGTGGTGGCCAGGGGCTCGGCAGCACGGTCGGTGAGCGCGACCGGCGTGGTGGAGCCACTTCGAACCATCGGCGTCAACAGCCAGTTGGCTGGAGTGATCTCGGCGGTGAACGTCCAGGAGGGCGACGCAGTGCGCGAGGGCCAGGTGCTCGCCCGTATCCAGGCGCCTGAGGTGGAGGCCCAGTTGGTGAGCGCCGAGGCTGCGCTGGGCGTGGCAGAGTCGCAGGCTGCAAGATCGGCGGCGCTGTTCAGGCAGCAGATCATCACCGCCGCCGAGCATGAGCGCGATCAGGCGGCTCTGGTGGCGGCCACGGCAACGCGCGACCAGTTGAAGACGCGTCTCGGTTATGCCGATGTGCGCGCTCCGGCGAGTGGGGTGGTCCTGGAGAAGCGGGTGGAAGCGGGTGATCTCGCCTCGACCCAATCGCGGCTGTTCTCCGTCGCCGACATCACCGTGCTGGTCGTACGCATGCCCATCTCGGAACTGGAAGTGGCGTCCCTGAGCGAGGGAATGCCCGTATCGTTGACGCTGGATGCCCTTCCCGGCCGCGAGGTCCAGGGTCGTATCAGGAGGGTCTTTCCAGCCGCTGACTCGGTCACCAGACTTGTGCCCGTGGAGGTTGCCATCAGCGGAGCGGCTGCCCGCGATGTGCGGCCAGGATTCCTTGCGCGTGCCCGATTCCCCATCGCACCGCGCAACGACGTGCTCCTGGTACCCAGCGCCGCGCTCCTTCAGAACCCTCGTGGTGCCGCCGTCTACGTGGTCAACGACGGCAAGGCGGCGCTTCGCGCTGTCCAGCGCGGTGCCACCTTCGAGGGACGGGTGGAGATAACCAGCGGATTGTCGGTTGGCGACACCGTGGTGGTGGCCGGCAACACCATGTTGCGTGAGGGCACGCAGGTACGTATCGCCACCCCGCCCAGTGACAGCATCCGGCCGGTTGAAGGAGCCGGCCGCGCCGTCGGGATGAACCGGTGA
PROTEIN sequence
Length: 386
MFFHRDPLAPRGARRRTGLSVAVLTVAALSAACSGAEPPATQTAQPGGRRGPQVVPVTVTVVARGSAARSVSATGVVEPLRTIGVNSQLAGVISAVNVQEGDAVREGQVLARIQAPEVEAQLVSAEAALGVAESQAARSAALFRQQIITAAEHERDQAALVAATATRDQLKTRLGYADVRAPASGVVLEKRVEAGDLASTQSRLFSVADITVLVVRMPISELEVASLSEGMPVSLTLDALPGREVQGRIRRVFPAADSVTRLVPVEVAISGAAARDVRPGFLARARFPIAPRNDVLLVPSAALLQNPRGAAVYVVNDGKAALRAVQRGATFEGRVEITSGLSVGDTVVVAGNTMLREGTQVRIATPPSDSIRPVEGAGRAVGMNR*