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scnpilot_solids1_trim150_scaffold_8812_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2596..3117)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 163.0
  • Bit_score: 158
  • Evalue 6.80e-36
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 147
  • Evalue 4.60e-33
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 147
  • Evalue 1.50e-32

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGTCTCTCGTCCTTCTCGGTCTTCCAGGTGTCGGCAAGACAACGATCGGAGCCGCCGTTGCAAGGCGACTCGGATGGCCGTTCGTCGACTTCGACGTGGAGATCGAGCGACGAGCCGGGATGACCATAAGCGAGCTGTTCTCGAGATTCGGCGAGGCCCACTTCCGGGAACTGGAATCGGGCCTTACCGATGAGTTCGTCGGCCGCGTGGGAACGGTTCTCGCACCCGGAGGCGGATGGGCCGTCCAACCTGGCCTGATGGATCGATTGCGACCCACGGCNNNNNNNNNNTATCTCCGGGCAAGTCCCGCCGTGGTGGCGGCCAGGATGGGGGCGGGCCAGGCGTCCCGACCCCTGTTGGACGGCCTGGAACCGGTCGCCGCGCTGGATCGTCTGCTCCTCGCGCGCAGCCACGCGTACGCTCGCGCGGACGCTGTGGTTGACACGGAACTTCTTGATCGGGAACAGGTTATACGTACCGTCGCGGCGCTTGCACCGGCCGGGGTGGGAGGCATAGGTTAG
PROTEIN sequence
Length: 174
MSLVLLGLPGVGKTTIGAAVARRLGWPFVDFDVEIERRAGMTISELFSRFGEAHFRELESGLTDEFVGRVGTVLAPGGGWAVQPGLMDRLRPTXXXXYLRASPAVVAARMGAGQASRPLLDGLEPVAALDRLLLARSHAYARADAVVDTELLDREQVIRTVAALAPAGVGGIG*