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scnpilot_solids1_trim150_scaffold_1473_curated_15

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(12116..12676)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 180.0
  • Bit_score: 217
  • Evalue 1.30e-53
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 175.0
  • Bit_score: 181
  • Evalue 1.80e-43
Peptide deformylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A607_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 175.0
  • Bit_score: 181
  • Evalue 5.80e-43

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGAGCGTACTCGAGATCCGCGTCCTCGGCGACCCGATACTGCGCGACACCACGAATCCGGTGGCGCAGGTGACGGACGACGTGCGCCGGCTCCTGGACGACATGTTCGAGACCATGTACGCGGCCAACGGCGTCGGCCTCGCTGCACCACAGGTGGGTCGCCGCGAGCGTATCTGCGTGATCGACGTCGGTGACGGGCCGCTGGCGCTCATCAACCCGCAGGTCACCCTCTCCCAGGGACGCGTGCGCGCCGAGGAAGGTTGTCTCTCCATTCCCGAGATCTTCGGCGAGGTGGAGAGGGCGCTCAGCGTTACGGTCGACGCGCTGGACGCCCAGGGAGAACCGATCACCGTGCATGGTTCGGAACTACTCGCCCGCGCCATGCAGCACGAGATCGACCACCTGCACGGCAAACTCTTCATCGACTACCTGAGCATGCTCAAGCGTCGCTCGGCAATGGCCGCCTGGGACAGGATGAAATCCGATTTCCCCGGCTTCCGACGTGTCCTGAGCGCCCAGGAAGTGGCCGAGCGCGGCAGTATCAGGGATGAGGAACTCTAG
PROTEIN sequence
Length: 187
VSVLEIRVLGDPILRDTTNPVAQVTDDVRRLLDDMFETMYAANGVGLAAPQVGRRERICVIDVGDGPLALINPQVTLSQGRVRAEEGCLSIPEIFGEVERALSVTVDALDAQGEPITVHGSELLARAMQHEIDHLHGKLFIDYLSMLKRRSAMAAWDRMKSDFPGFRRVLSAQEVAERGSIRDEEL*