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scnpilot_solids1_trim150_scaffold_2566_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 4953..6794

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MS42_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 570.0
  • Bit_score: 706
  • Evalue 1.70e-200
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFA91084.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 587.0
  • Bit_score: 720
  • Evalue 1.60e-204
msbA7; Lipid A export ATP-binding/permease MsbA; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 570.0
  • Bit_score: 706
  • Evalue 5.30e-201

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
GTGACGAATCCAACGGGGCGGAAACGAGGCAGGGGAGCCCCGGCGGGCCGGCGCGGTGACCCGCGCGCGGCCTGGCGCGCGCTCGGCTACCTGCGCGCCCACCGGTTCGAGTCTGTAGGTGCACTCCTCTCGCTGCTCGGGGTGTCCGCTGCCACTCTGGCCACTCCGCAACTGATCCGTTACGCGATCGATGACGGCATCACCGCCGGCTCCTGGGCCGCAGTGCTGCTGGCCGTGGGTGGGCTCCTGGGTACAGCAGCCATCCGGGGCCTGCTCTCGTTCTTCCAGGGATACCTGGCCGAGCGGGCTTCGCAGGGCGTCGCCTACGACATTCGCGAAGCGCTGTTCGGGCATATCGAGAAGTTGAGTTTCAGCTTCTACGATCGCGTGCAGACTGGTCAGCTGCTTACCCGGCTGACGAGCGACGTGGAGCAGATCCGCACCTTTGCCGGGACTGGAGTGGTGCAACTGGTGGCTGCGATAGCGATGCTCGCAGGCACGGCGACGCTGCTCCTCATACTGAACGTGCGACTGGGCGCGGCGGTGCTCCTGACGGTCGTGCCGATCCTGTTCCTGCTCATCCGGTTCGTGTCGCGAGTGGGGCCGTTGTTCGGCGTTGTGCAGCAGACGCTGGGGCGGCTCAATACGATCCTGCGGGAGGACATGGCCGGCGTGCGCGTCGTTCGGGCATTCGCTCGCGAGGCACATGAAGATGCCCGCTACCAGGCCGTGAACCATGCCCTGCGCGATCGTAATGTGGCCGTCGTGCACGCGGTCAGCGACAATTTTCCGTTCATCTTCCTCTTTGCCAACCTGGGTACGCTGGTAGTGATCTGGCTGGGCGGCAGACAGGTGATCGGCGGCACGCTAACGCTGGGCGAGCTGATCGCCTTCAATTCCTATCTTGCCTTCCTGGTGCAGCCGTTACTCACCATCGGTTTCCTGGCAGCGTCCATATCCCGGGCTGGAGCATCTGCGGAGCGGGTGTTCGAGGTGCTGGACGCGCCTCTGGAGGTTACCGACCAGGTGGACGCCACCGTACTGCCGCCGTTCGAGCACGACATCGAGTTCCGGGACGTCAGCTTCCGCTATCCCGGTACCGACCGCGATGTGCTGCACGACGTCAGCTTTCGCATCATTGCCGGCCAGATGGTCGCGGTGCTCGGCGGCACTGGATCAGGCAAGTCGACGCTCGTCAATCTCATCCCGCGCTTCTACGACGTGACCGAAGGCGCGGTGCTCGTGGACGGACACGATGTGCGTGAAGTGACACTGCAGAGCCTTCGCCGGCAGATCGGCGTGGTACTGCAGGAAGCGCGGCTGTTCGCCGGCACGGTGCGCGAGAACATCGTCTTCGGACGTCCTGATGCCACCGACGCCGAAGTGGAGTCGGCGACAGAGGCCGCGCAGGCGCATGACTTCATAAGCAGGCTGCCGGGTGGTTATGAGACCATTGTCGGCGAGCGCGGCGTCACGCTCTCCGGCGGTCAGCGTCAGCGGCTCGCGATCGCCCGGGCGCTGCTCGTCGACCCCCGCATCCTCATCCTGGACGACAGCACGTCGGCGGTGGACATGACCACCGAGGCTGCGTTGCGTGAGGCGCTGGACCGCCTGATGCGCGACCACAACCACACCGTCGTGGTGATCGCGCAGCGCGTGAGTACGGTGCGCGCCGCCGACCTCATCCTCGTCCTGGATGAGGGGCGCATAGTCGCCCGCGGCACCCATGAGGAGCTGCAACGCGAGAGTGAGGTCTACAACGAGATTCTCGGTTCGCAGCTCGTGAGCGACGATGACCTCACGGCGGCGGACGTCGGCTGGAGCGAGGACCGCGGACCGTGA
PROTEIN sequence
Length: 614
VTNPTGRKRGRGAPAGRRGDPRAAWRALGYLRAHRFESVGALLSLLGVSAATLATPQLIRYAIDDGITAGSWAAVLLAVGGLLGTAAIRGLLSFFQGYLAERASQGVAYDIREALFGHIEKLSFSFYDRVQTGQLLTRLTSDVEQIRTFAGTGVVQLVAAIAMLAGTATLLLILNVRLGAAVLLTVVPILFLLIRFVSRVGPLFGVVQQTLGRLNTILREDMAGVRVVRAFAREAHEDARYQAVNHALRDRNVAVVHAVSDNFPFIFLFANLGTLVVIWLGGRQVIGGTLTLGELIAFNSYLAFLVQPLLTIGFLAASISRAGASAERVFEVLDAPLEVTDQVDATVLPPFEHDIEFRDVSFRYPGTDRDVLHDVSFRIIAGQMVAVLGGTGSGKSTLVNLIPRFYDVTEGAVLVDGHDVREVTLQSLRRQIGVVLQEARLFAGTVRENIVFGRPDATDAEVESATEAAQAHDFISRLPGGYETIVGERGVTLSGGQRQRLAIARALLVDPRILILDDSTSAVDMTTEAALREALDRLMRDHNHTVVVIAQRVSTVRAADLILVLDEGRIVARGTHEELQRESEVYNEILGSQLVSDDDLTAADVGWSEDRGP*