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scnpilot_solids1_trim150_scaffold_11109_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(1354..2145)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Q6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 214.0
  • Bit_score: 262
  • Evalue 4.70e-67
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 217.0
  • Bit_score: 293
  • Evalue 2.70e-76
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 214.0
  • Bit_score: 262
  • Evalue 1.50e-67

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGGACAAGACTACGACGACCTTTCAGGCGACGGCACACGCCGCGGACGGGACAGCGCGCGAGCGCGTGGCTCTTCCGGCGGAGTTGTTCGACGGCACGGTGAACATGCCCGTGATGCACCAGGTGGTGAAGGCATACATGGCCAACCAGCGCCAGGGTAACGCGTCGACGAAGACGCGTGGACAGGTGGTGGGTGGCGGCAGGAAGCCGTGGAAGCAGAAGGGGACGGGACGTGCTCGTCAGGGCTCGATCCGTGCGCCCCACTTCGTGGGCGGTGGAACCGTGTTCGGTCCCACCTCCGATCGCAACTACGAGCAGAAGGTACCGCGTCAGCTCCGCTCCCTTGGCCGCAAGAGTGCGATGAACGCTCGCGCCCGTGAGGATGCGCTGCTGGTCATCGACGCGATCCGGATGGACGTGCCGAAGACCTCGACGATGCTGGCGTTGCTGGATCGCCTCGGTGCAGCCGACCGCAAGGTGCTGCTGCTGACCGACGGCGTGAAGCCGACAGTGTACATGAGCGCGCGCAATCTTCAGAACGTGCACGTGATGCCGTACAGCGACGCTTCCACATACCACATCCTCTGGTCGGACGTGTTGGTGGTGGAGGCTGGCGCGCTCGGCGAGCCGCTGGAGAGCACCGGAGCGGTGGAGGCTGCCACGCCGGCCAAGCGGGCGGGCCGCAAGACGACCTCGGCGAGTGCCGCCGCGGGCGAGACCAGCGAGGCCGCGCCGAAGAAGCGCGCCACGCGGAAGAAGGCCGCCGGCGAGTCGTCGGCCGAGGAGGCTTAA
PROTEIN sequence
Length: 264
MDKTTTTFQATAHAADGTARERVALPAELFDGTVNMPVMHQVVKAYMANQRQGNASTKTRGQVVGGGRKPWKQKGTGRARQGSIRAPHFVGGGTVFGPTSDRNYEQKVPRQLRSLGRKSAMNARAREDALLVIDAIRMDVPKTSTMLALLDRLGAADRKVLLLTDGVKPTVYMSARNLQNVHVMPYSDASTYHILWSDVLVVEAGALGEPLESTGAVEAATPAKRAGRKTTSASAAAGETSEAAPKKRATRKKAAGESSAEEA*