ggKbase home page

scnpilot_solids1_trim150_scaffold_12538_curated_1

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(29..1894)

Top 3 Functional Annotations

Value Algorithm Source
Putative Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA26_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 582.0
  • Bit_score: 725
  • Evalue 4.60e-206
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG91711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 599.0
  • Bit_score: 762
  • Evalue 4.80e-217
putative Lipid A export ATP-binding/permease protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 582.0
  • Bit_score: 725
  • Evalue 1.50e-206

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1866
GTGACCACCTCAACCGCGGACAACACGACTGCCGCCGGCCAACCGGTCGACGGCCGGCGGTCAGGCAGTGGCGCCAGCCGCAAGCTGGTCCCACCCACCCCCCTCATCCGGCTCTTCCCCCGGTTGCGGCCCTACGTCGGCCGGCTCTCCATTGCCGCCGTGTGCCTTGTCGGTGCAGCAGCAGCCGCCCTCGCCTTTCCGGCTGTCGTCAGGCATCTGCTGGACGCCGCCTTCCAGGCCCGCGATCGCAACTTGCTGGATCGCATAGCACTCTTCCTGCTCGGCATCTTCGCCCTGCAGGGAGTGTTCAATTTCGTGCAGGTCTACCTGCTCACGTCGACCGCTGAACGGGTAATCGCACGATTGCGGGAGGATCTCTTCGCCCACCTCGTGCGACTCTCGCCAGGGTTCTTTACCGAGCTGCGCACGGGCGAACTCACGAGCCGGATGTCGAACGACCTGGCCGTGCTCCAGTCCACCTTCAGCTCGTGGATCTCGGAGTTCAGCCGCCAGAGTCTGCTCCTCGTGGGTGGCATCATCATGCTCAGCCTCACCCACCGCTCGCTGACGCTGACGACGCTCGCGGTGGTGCCGATCGTGGTAGGGGCGGCGATCCTTTTCGGACGGCGGCTGAGGAGGGCCACGACCGGTGTTCAGGATCGCATTGCCGACGCGATGGGTACGGCCGACGAGGTGCTGTCGCAGATCCGGATCGTGCAGAGCTTCACGCGCGAGGAGGCCGAGGTGGTGCGCTTCCGCGGGCTCCTGGGCGGGGTGGTGGATGCCGCCGTACACCGTGCCTTCCTCCGCGCACTCTTCTTTGGCGTGGTGGGTTTCGTGGCCTTCGGCGGTGTGGTGGCGGTGCTCTGGCAGGGCGGACGACTCGTGCTGGACGGCGTGCTGACAGCCGGATCGCTCGTCTCCTTCCTGCTGTATGCGATCACCGTGGCTGGCGCGGTGGGCTCGCTGGCCTCGCTCTTCGGCAGCTACCAGGAGGCGGTGGGCGCGGCGCGGCGAGTGTTCGAGCTCCTGGCCACTCAACCCACCGTCGTTGAACCTGTTCCGGCGACGCGTCTCGAGCATCCGGTGCGCGGTGCGGTCGCCTTCCAGAACGTCGGCTTCCGCTACTCCGACCAATCGCCCCCGGTCCTGAACGACGTATCATTTTCCGTCGCGCCGGGCGAGGTTCTCGCCCTCGTGGGGCCGTCGGGCGCGGGCAAGACGACCATCGCTTCCCTCCTGCCACGTTTCTGGGATGTGACTTCTGGCCGCATCACCCTTGACGGCCACGACGTACGCGACCTCGCGCTGGCCGACCTGCGCGGCGCGATCGGCATGGTTCCCCAGGAGCCGGCATTGTTCAGCGGCACGATACGCGACAACATCCTGCTGGGTCGGCCCGACGCGACCGACGCCGAGGTACGCGTGGCAGCATCGGCGGCCCACGCCGCCGAGTTCATAGACCGGCTGCCCGAAGGTTATGCGACTCCGGTCGGCGAGCGCGGCGTGAAGTTGAGTGGCGGTCAGCGCCAACGCCTGGCGATAGCTCGCGTCTTCCTGAAGAATCCGGCTGTGGTGCTTCTCGACGAGGCAACCTCCAGCCTGGACACGGCGAGCGAGCAACTCGTGGAAGCGGCGATGGAGGAACTGCTGCGCAACAGGTCGACGATCATCATCGCCCACAGGCTGAGCACCGTCCGTCGCGCACACCGTGTGCTGGTGCTCAAACATGGGGTGATAGTGGAGCAGGGCCGGCATGACGAACTGATGGAGATCGACGGGCTCTACGCGCAGCTTTACCGGAGCCAGTTCCGGGCGGACGACGAACTAACCCTTGCGGCTGGTCAGCGTATCCGGTTGGACTGA
PROTEIN sequence
Length: 622
VTTSTADNTTAAGQPVDGRRSGSGASRKLVPPTPLIRLFPRLRPYVGRLSIAAVCLVGAAAAALAFPAVVRHLLDAAFQARDRNLLDRIALFLLGIFALQGVFNFVQVYLLTSTAERVIARLREDLFAHLVRLSPGFFTELRTGELTSRMSNDLAVLQSTFSSWISEFSRQSLLLVGGIIMLSLTHRSLTLTTLAVVPIVVGAAILFGRRLRRATTGVQDRIADAMGTADEVLSQIRIVQSFTREEAEVVRFRGLLGGVVDAAVHRAFLRALFFGVVGFVAFGGVVAVLWQGGRLVLDGVLTAGSLVSFLLYAITVAGAVGSLASLFGSYQEAVGAARRVFELLATQPTVVEPVPATRLEHPVRGAVAFQNVGFRYSDQSPPVLNDVSFSVAPGEVLALVGPSGAGKTTIASLLPRFWDVTSGRITLDGHDVRDLALADLRGAIGMVPQEPALFSGTIRDNILLGRPDATDAEVRVAASAAHAAEFIDRLPEGYATPVGERGVKLSGGQRQRLAIARVFLKNPAVVLLDEATSSLDTASEQLVEAAMEELLRNRSTIIIAHRLSTVRRAHRVLVLKHGVIVEQGRHDELMEIDGLYAQLYRSQFRADDELTLAAGQRIRLD*