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scnpilot_solids1_trim150_scaffold_6192_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 1464..2330

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 254.0
  • Bit_score: 343
  • Evalue 2.50e-91
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 256.0
  • Bit_score: 299
  • Evalue 1.20e-78
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 256.0
  • Bit_score: 299
  • Evalue 3.80e-78

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 867
GTGCTGCTAAGTCAATCGCTTCCGCCACGCGGCGAGAGCGTCCACGAACTCCTTGACAGCATTGACGGCTCCGGTAAGTTGCCCGCCATGTCGTCGCGCAACGTAAAGCTCGTCCTGCACTACGACGGCTCCGCCTTTGCCGGCTGGCAACGGCAACCCTTGCAACGCACTGTCCAGGGTGAGATGGAATCGGCGTTGCGCAAGCTTTGCAATCTCCCGGTCGCCGCCCAGGGAGCCGGTCGGACCGATGCAGGGGTCCACTCCCGTGGACTTGCCGTGGGAGTGAAGGTGCCCCAACGATGGACGCCTGAGACCCTGAGGAAGGCACTGAATGCCGTCCTGCCCGACGATACATGGGTAGCCGAGGCGCACGAGATGCGCGCCGATTTTCACGCCCGCTTCAGCGCCGTCGCCCGTCGCTACAGTTATCACGTGGGGCTCGATGATGCTGCAGCGTCCCCCTTCCGCCGACGTTACGAGTGGGCCTTCCGACGCCCGATCGACAGGGCATCGCTGGACTCGTCAGCGGCTGTTCTCGTTGGGGATCACTCCTTTCTCGCGTTCGCCGTCCGCGGCACCGCTCCCGCCACGGACGACCATCGTTGCGTCATCTCCGATGCGCGATGGACTCTGACCGATGGTTGTCGACTGGTATTCCATGTCGAGGCGAACAGGTTTCTCCACCACATGATCCGTTTCCTGGTCGGCACCATGCTCGACGTAGCCACCGGCCGTCGCGACAGCGAGGACATCGCGGCGCTGCTTGAGGCACGGGACAACAGCAGCGTCTCCCCTCCCGCGCCGGCGCATGCGCTCTTCCTGGAGCACGTCAGCTATCCGGCTCACCTCTATCTTTCCGGCACATGA
PROTEIN sequence
Length: 289
VLLSQSLPPRGESVHELLDSIDGSGKLPAMSSRNVKLVLHYDGSAFAGWQRQPLQRTVQGEMESALRKLCNLPVAAQGAGRTDAGVHSRGLAVGVKVPQRWTPETLRKALNAVLPDDTWVAEAHEMRADFHARFSAVARRYSYHVGLDDAAASPFRRRYEWAFRRPIDRASLDSSAAVLVGDHSFLAFAVRGTAPATDDHRCVISDARWTLTDGCRLVFHVEANRFLHHMIRFLVGTMLDVATGRRDSEDIAALLEARDNSSVSPPAPAHALFLEHVSYPAHLYLSGT*