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scnpilot_solids1_trim150_scaffold_2063_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(254..1729)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 501.0
  • Bit_score: 693
  • Evalue 2.00e-196
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:AHG90787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 493.0
  • Bit_score: 797
  • Evalue 1.10e-227
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 501.0
  • Bit_score: 693
  • Evalue 6.40e-197

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1476
ATGAAGACCGGCCTTCATCAGAGCACCCAACTCCGCCAGGAGCTGAAGATCAATCCACGCCTCTACCAGGCGATGGATCTGCTCTACATGCCCCTTCTCGATCTTCAGCAACACCTCAAGCAGGAGCTGCTGAACAACCCGTTCCTCGAGCTCGTGGAACTGGACGACGATGAGGACGAGGACGAGGACACGGAAACCGAGGGGGCCGAGGCCACGCCCGAGGAGGAGTCGAAGAAGGACGAGATCGACTGGGAGGAGATCCTTCTCGATGGATTCGACACGGGGGGGCATCGAGAGGAGCATGAGGAGCGCGAGTACTACGAGCCCGTAACCGTGGCCACGCGCGACCTGAGCGATCACCTGCGCGACCAGATTCGCCTGCTCGACCTCACACCCCGTGAACAACTGCTTGCCGATGAGTTCATCGGCAACATCAACGAGGAGGGGTATCTCTCCTGTTCCCTGGCCGAGATACGCGCCGGCATCAATGACGTGGTGCGAGCGGCCGCCGCTGATGCAGGCATGGAGGACGCGGAAGACGACGAACTGCCGCTCTACACCACCGATGAGGTGGACGCCATGCTGACGGTGGTACAGGGACTTGACCCCGCAGGCGTCTGCGCCCGCGACCTGCGCGAGTGCCTCATGCTGCAGCTACGGGAGGCCGGGCTCGAGCAATCCGTCCCGTACAGGTTGGTCCGGGACTGCTTCGAGGAACTGATCAACCACCGCTGGAGCGAGATCTCCAAGCGGTTCGGTATCAGCCCGATCGACGTCCAGGCGGCTGCCGATGAGATTGCGAAGCTGGACCCGAAGCCGGGCCTGGTCTACAGTGACGCGGGCGACAACTACATCATTCCGGACCTGGTGGTGGACAAGATCGACGGGCACTATCACGTCTTTCTCAATGACGCGAACCTGCCGCGCCTGAAGCTCAGCCGCACGTACCAGGAAATCGCGCGCGACAAGAAGAAGTTCGAGGGCGAGAACAAGGAATTCATCTCCAACAAGCTGAATTCCGCCAACTGGATGATCCAGGCGATCGAGCAACGACGACAGACCATGCTCAAGGTGATGAACTACATTGTCGATCGTCAGCGCGAGTTCTTCGAGAAGGGCGTCCAGTACCTCAAGCCTCTGACACTGCGTGAGGTCGCCGAGGTCATCAACATGCATGAATCGACCGTCAGCCGGGTGACCAACGAGAAGTTCGTTCAGACTCCTCGCGGCGTCCTGCCCCTCAAGTTCTTCTTCAGCTCCGGTCTCTCCACCACCGGTGGCGAGGACGTCTCGGCGCGCGGCATCAAGGCCCAGATCGAGAAGCTGGTGGCGGATGAGGATCCCAAGGATCCACTCACTGACCAGGCGATCGTGAACATCCTTCGTGAGACGGGTGTCCAGATTGCGCGACGCACGGTTGCCAAGTATCGCGATCAACTGGGAGTACTGTCGGCGCGCATGCGCAAGCGAGTATGA
PROTEIN sequence
Length: 492
MKTGLHQSTQLRQELKINPRLYQAMDLLYMPLLDLQQHLKQELLNNPFLELVELDDDEDEDEDTETEGAEATPEEESKKDEIDWEEILLDGFDTGGHREEHEEREYYEPVTVATRDLSDHLRDQIRLLDLTPREQLLADEFIGNINEEGYLSCSLAEIRAGINDVVRAAAADAGMEDAEDDELPLYTTDEVDAMLTVVQGLDPAGVCARDLRECLMLQLREAGLEQSVPYRLVRDCFEELINHRWSEISKRFGISPIDVQAAADEIAKLDPKPGLVYSDAGDNYIIPDLVVDKIDGHYHVFLNDANLPRLKLSRTYQEIARDKKKFEGENKEFISNKLNSANWMIQAIEQRRQTMLKVMNYIVDRQREFFEKGVQYLKPLTLREVAEVINMHESTVSRVTNEKFVQTPRGVLPLKFFFSSGLSTTGGEDVSARGIKAQIEKLVADEDPKDPLTDQAIVNILRETGVQIARRTVAKYRDQLGVLSARMRKRV*