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scnpilot_solids1_trim150_scaffold_2061_curated_10

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 9890..10195

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 2.30e-40
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 1.00e-39
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 7.20e-40

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCCGAGGACATCCAGGGTTACCTGCGGCAGCAGATGCCTGCCTGGCGCGAGGAGCGGCCCGGCGTGGTGGAGATGAAGGTAGCGGTGATGGGTTGCGTGGTGAACGGGCCGGGCGAGAGCAAGCACGCCAACCTGGGCATCTCCCTACCCGGCACCTTCGAGGAGCCCAAGGCACCGGTCTACATGGACGGCCAGTTCCTGACCACGCTCAAGGGCGACCACATAGTGGAGGAGTTCCTGGTCATCCTCGAGGACTATGTCGAACGGACGTACGCGCCGGGGGCAGCAGAGGTCACCTCGTAG
PROTEIN sequence
Length: 102
MAEDIQGYLRQQMPAWREERPGVVEMKVAVMGCVVNGPGESKHANLGISLPGTFEEPKAPVYMDGQFLTTLKGDHIVEEFLVILEDYVERTYAPGAAEVTS*