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scnpilot_solids1_trim150_scaffold_5562_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(2456..2665)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 67.0
  • Bit_score: 85
  • Evalue 2.70e-14
RNA polymerase Rpb6 {ECO:0000313|EMBL:AHG90857.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 67.0
  • Bit_score: 95
  • Evalue 2.80e-17
rpoZ; putative RNA polymerase omega subunit similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 67.0
  • Bit_score: 85
  • Evalue 8.60e-15

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 210
ATGCAGGTCTTCACCCCGAACGAACTCGCAAAGCACGCTGCGAACAAGTATCTGTCAGTGCTCGTCGCGGCGCAGTACGCGCGGGCGATGAATGAATTCCCGCGCCTGGGCGGTACCGGTCGTGAGAAGAAGCTGACCACGCGGGCACTGGAGGAGCTTGCCGCAGGCAACATCTCCTTCCGCATCGTGCCCCGCCGACGCCCGGCGTAG
PROTEIN sequence
Length: 70
MQVFTPNELAKHAANKYLSVLVAAQYARAMNEFPRLGGTGREKKLTTRALEELAAGNISFRIVPRRRPA*