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scnpilot_solids1_trim150_scaffold_9413_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(1704..2237)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE4E6 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 174.0
  • Bit_score: 138
  • Evalue 6.90e-30
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 175.0
  • Bit_score: 171
  • Evalue 7.90e-40
ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 185.0
  • Bit_score: 123
  • Evalue 7.30e-26

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGGTCGAGCCCGAGTGGGTCATAGTCGGGCGCGTCCGCAAGACTCACGGGTTGCAGGGCGAACTCGTTGTCGAGGCGATCACCGACCGGCCGGGCGAGATCTTCGCGCCCGGCCGGCGTGTCGTTGCGGGCACCGCCACGGCGCGTATCGGAACGTCGCCGCGCGACTTCGTCGTCCTGCGCTCCCGGCCGTTCAAGGGCGGCTTCATCATCGCCTTCCAGGGCCTGGATGACCGCGATGAGGCCGAGAAATGGCGCGGACGATTTCTCTTCATCCCCGGGTCCGAACTGGCGCCCCTGGAGGAAGGGGAGGTGTACGTGCATGACCTCCACGGCCTGCGCGTGGAACTCACCGACGGGACGCTTGTCGGGACGATCTCCGATATCTACGAACTGCCGCAGGGCCTGGGGCTGGACGTTCGGCGGGAGGGACTGCCGAGCGTCGTCGTTCCCTACCGCGCCGAGGTGGTGCGGAGTGTCGATGTAGCTGCGGGGATGATGGTGATCGACCCACCGGCGGGATTGCTGGACTGA
PROTEIN sequence
Length: 178
MVEPEWVIVGRVRKTHGLQGELVVEAITDRPGEIFAPGRRVVAGTATARIGTSPRDFVVLRSRPFKGGFIIAFQGLDDRDEAEKWRGRFLFIPGSELAPLEEGEVYVHDLHGLRVELTDGTLVGTISDIYELPQGLGLDVRREGLPSVVVPYRAEVVRSVDVAAGMMVIDPPAGLLD*