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scnpilot_solids1_trim150_scaffold_2336_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 669..1586

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHN0_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 299.0
  • Bit_score: 381
  • Evalue 6.20e-103
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 299.0
  • Bit_score: 381
  • Evalue 1.90e-103
RNA polymerase sigma70 factor {ECO:0000313|EMBL:AGP32642.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 299.0
  • Bit_score: 381
  • Evalue 8.70e-103

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCTCGGCTCCGTCGTCGACGCCGAGGATGCGGTGCAGGAGTCGATGCTCCGCGCATGGAAGTCCATCGACCGGTTCCAGGGGCAGTCGTCGCTCAGGACGTGGCTGTATCGCATTGCCACCAATGTCTGCCTCGACACCCTCTCGGCCACCGCTCGACGCCGGGTACGCCCGGTGGAGCTCTCCGCGACGCCGGCGGTGGTGGACGACGACCTGGTGCTCGAGCAGCGGCCGCGCGAGTACTGGGTGGAGCCGATTCCCGATGCGATGGCCCTGCCGGCCGCCGACACCGATCCCGAGGAGCAGGCGATAATGCGTGAGAGCATCCGCCTCGCCTTTGTCGCCGCGCTGCAGTACCTGCCTCCGCGCCAGCGCGCCGTGCTGCTCCTCACCCAGGTTCTCAATTGGTCGGCGGCCGAGGTGGCGGAAGGCCTGGAGATGAGCGTGGCAGCGGTCAACAGCGCCCTCCAGCGCGCCCGGATGACGCTCGCCACACGGAATCCTGCCACACTGCCGCGCGAGCTTTCCGAGGACCAGAAGCAGCTTGTGGCACGCTACGTGGAAGCATTCGAGAAATACGATGTGGCGGCGCTGACGCGGCTCCTCCACGACGAGGCGACGCTCTCCATGCCGCCGTATGACCTGTGGCTGCAGGGTCACGACTCCATCGCTCGCTGGCTGCTCGGTCCGGGCATCGGCTGCAACGGGTCCCGGCTCGTACCGGTCGAAGCATGTGGCGGCACGCCCGCATTCGCCCACTACCGGCAGGGCGGGGCCAGGGCGTGGGCGCTGCTGATGCTCGAGCTCGATGGCGACCGGATCACGAGCATGACCTCGTACCTGGACGTGGAGACGCTCTTCCCGCGGTTCGGACTACCGCTCCAGCTCACGAACCAACGGCACGCGCTGAGCCGGTGA
PROTEIN sequence
Length: 306
MLGSVVDAEDAVQESMLRAWKSIDRFQGQSSLRTWLYRIATNVCLDTLSATARRRVRPVELSATPAVVDDDLVLEQRPREYWVEPIPDAMALPAADTDPEEQAIMRESIRLAFVAALQYLPPRQRAVLLLTQVLNWSAAEVAEGLEMSVAAVNSALQRARMTLATRNPATLPRELSEDQKQLVARYVEAFEKYDVAALTRLLHDEATLSMPPYDLWLQGHDSIARWLLGPGIGCNGSRLVPVEACGGTPAFAHYRQGGARAWALLMLELDGDRITSMTSYLDVETLFPRFGLPLQLTNQRHALSR*